RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA637219" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA637219 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31135787 31135787 PRJNA637219_S_NODE_10395_length_168_cov_0.857143_g10350_i0 PRJNA637219 10395 168 0.857143 1.44000024 Metazoa 33208 Cnidaria other_Eukaryota 46.6 5.69e-4   NR XP_057315388.1 13093 g10350 i0 56.4 3.51785714285714 39 17 69.6 0 3 119 237 275 XP_057315388.1 uncharacterized protein LOC130656529 isoform X1 [Hydractinia symbiolongicarpus] diamond 591 46.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
31787592 31787592 PRJNA637219_S_NODE_15617_length_162_cov_0.902655_g15572_i0 PRJNA637219 15617 162 0.902655 1.4623011 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 49.3 6.21e-5   NR XP_031553876.1 6105 g15572 i0 40.7 1 54 32 100 0 1 162 512 565 XP_031553876.1 nucleolar complex protein 2 homolog [Actinia tenebrosa] diamond 162 49.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
32452474 32452474 PRJNA637219_S_NODE_12139_length_166_cov_0.871795_g12094_i0 PRJNA637219 12139 166 0.871795 1.4471797 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 65.1 1.66e-10   NR XP_020910043.1 2652724 g12094 i0 64.6 0.867469879518072 48 17 86.7 0 146 3 477 524 XP_020910043.1 NAD(P) transhydrogenase, mitochondrial [Exaiptasia diaphana] diamond 144 65.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;