RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA637219" and tax_phylum = "Candidatus Culexarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Culexarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA637219 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9537218 9537218 PRJNA637219_S_NODE_10988_length_167_cov_0.864407_g10943_i0 PRJNA637219 10988 167 0.864407 1.44355969 Candidatus Culexarchaeum yellowstonense 2928963 Archaea Archaea 81.6 2.18e-16   NR WP_304329652.1 2928963 g10943 i0 74.5 2.94610778443114 55 14 98.8 0 2 166 67 121 WP_304329652.1 phosphopyruvate hydratase [Candidatus Culexarchaeum yellowstonense] diamond 492 81.6 1 Archaea   Thermoproteati Candidatus Culexarchaeota Candidatus Culexarchaeia Candidatus Culexarchaeles Candidatus Culexarchaeaceae Candidatus Culexarchaeum Candidatus Culexarchaeum yellowstonense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;