RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA637219" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 6 ✖

bioproject 1

  • PRJNA637219 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20281504 20281504 PRJNA637219_S_NODE_476_length_562_cov_5.508772_g432_i0 PRJNA637219 476 562 5.508772 30.95929864 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 296 4.899999999999999e-100   NR MBX9724270.1 2364082 g432 i0 88.8 0.859430604982206 161 18 85.9 0 561 79 10 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 483 296 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28628671 28628671 PRJNA637219_S_NODE_12907_length_165_cov_0.879310_g12862_i0 PRJNA637219 12907 165 0.87931 1.4508615 Synechocystis sp. PCC 75 1143 Bacteria Bacteria 74.7 3.09e-14   NR WP_148298024.1 927677 g12862 i0 77.8 0.818181818181818 45 10 81.8 0 29 163 1 45 WP_148298024.1 hypothetical protein [Synechocystis sp. PCC 7509] diamond 135 74.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Merismopediaceae Synechocystis Synechocystis sp. PCC 7509
28912340 28912340 PRJNA637219_S_NODE_14968_length_163_cov_0.894737_g14923_i0 PRJNA637219 14968 163 0.894737 1.45842131 Microcoleaceae cyanobacterium UBA11344 2055792 Bacteria Bacteria 45.8 4.51e-4   NR HAT15612.1 2055792 g14923 i0 76 0.460122699386503 25 6 46 0 162 88 107 131 HAT15612.1 serine hydrolase [Microcoleaceae cyanobacterium UBA11344] diamond 75 45.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae   Microcoleaceae cyanobacterium UBA11344
29587833 29587833 PRJNA637219_S_NODE_3470_length_254_cov_1.785366_g3425_i0 PRJNA637219 3470 254 1.785366 4.53482964 Bacteria 2 Bacteria Bacteria 114 3.73e-28   NR MEO1636501.1 3023190 g3425 i0 66.3 18.6259842519685 83 28 98 0 254 6 189 271 MEO1636501.1 alkene reductase [Cyanobacteria bacterium J06631_9] diamond 4731 115 0.991304347826087 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium J06631_9
29923139 29923139 PRJNA637219_S_NODE_15971_length_162_cov_0.902655_g15926_i0 PRJNA637219 15971 162 0.902655 1.4623011 Microcoleus sp. EPA2 2841654 Bacteria Bacteria 105 1.85e-25   NR WP_341731641.1 2841654 g15926 i0 88.7 9.81481481481481 53 6 98.1 0 2 160 8 60 WP_341731641.1 transposase [Microcoleus sp. EPA2] diamond 1590 105 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Microcoleus Microcoleus sp. EPA2
32294380 32294380 PRJNA637219_S_NODE_7339_length_191_cov_1.380282_g7294_i0 PRJNA637219 7339 191 1.380282 2.63633862 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 60.5 1.27e-9   NR MBX9722668.1 2364082 g7294 i0 66.7 1.49214659685864 48 16 75.4 0 189 46 89 136 MBX9722668.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 285 60.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;