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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA635874" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 21 ✖

bioproject 1

  • PRJNA635874 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18459071 18459071 PRJNA635874_P_NODE_19935_length_353_cov_1.100000_g19788_i0 PRJNA635874 19935 353 1.1 3.883 Caudoviricetes sp. 2832643 Viruses Viruses 185 1.04e-53   NR XOS43889.1 2832643 g19788 i0 75.9 1.87818696883853 116 28 98.6 0 5 352 97 212 XOS43889.1 MAG: phage protein [Caudoviricetes sp.] diamond 663 185 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
23560476 23560476 PRJNA635874_P_NODE_53879_length_248_cov_0.880000_g53732_i0 PRJNA635874 53879 248 0.88 2.1824 Bacteriophage sp. 38018 Viruses Viruses 90.1 9.61e-22   NR QHJ81528.1 38018 g53732 i0 53 0.798387096774194 66 31 79.8 0 5 202 1 66 QHJ81528.1 MAG: hypothetical protein [Bacteriophage sp.] diamond 198 90.1 1 Viruses               Bacteriophage sp.
26637749 26637749 PRJNA635874_P_NODE_58741_length_246_cov_0.890173_g58594_i0 PRJNA635874 58741 246 0.890173 2.18982558 Campylobacter phage CJLB-4 2781358 Viruses Viruses 67.4 1.66e-12   NR QPB10280.1 2781358 g58594 i0 62.3 0.646341463414634 53 20 64.6 0 231 73 37 89 QPB10280.1 hypothetical protein [Campylobacter phage CJLB-4] diamond 159 67.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lambdavirus Campylobacter phage CJLB-4
26732445 26732445 PRJNA635874_P_NODE_9241_length_479_cov_1.546798_g9094_i0 PRJNA635874 9241 479 1.546798 7.40916242 Caudoviricetes sp. 2832643 Viruses Viruses 112 9.32e-29   NR DAH93386.1 2832643 g9094 i0 62.4 0.532359081419624 85 32 53.2 0 256 2 1 85 DAH93386.1 MAG TPA: hypothetical protein, partial [Caudoviricetes sp.] diamond 255 112 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26859841 26859841 PRJNA635874_P_NODE_62761_length_245_cov_0.895349_g62614_i0 PRJNA635874 62761 245 0.895349 2.19360505 Stenotrophomonas phage Silvanus 2859659 Viruses Viruses 81.6 7.76e-16   NR QYW02488.1 2859659 g62614 i0 62.8 0.955102040816327 78 29 95.5 0 236 3 803 880 QYW02488.1 tape measure protein [Stenotrophomonas phage Silvanus] diamond 234 81.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Stenotrophomonas phage Silvanus
27365763 27365763 PRJNA635874_P_NODE_64003_length_244_cov_0.900585_g63856_i0 PRJNA635874 64003 244 0.900585 2.1974274 Staphylococcus phage S-CoN_Ph17 3076573 Viruses Viruses 149 4.729999999999999e-42   NR WNM54416.1 3076573 g63856 i0 92.5 2.95081967213115 80 6 98.4 0 241 2 61 140 WNM54416.1 portal protein [Staphylococcus phage S-CoN_Ph17] diamond 720 149 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Sextaecvirus Staphylococcus phage S-CoN_Ph17
27630710 27630710 PRJNA635874_P_NODE_41384_length_265_cov_1.093750_g41237_i0 PRJNA635874 41384 265 1.09375 2.8984375 Marafivirus 12051 Viruses Viruses 129 1.28e-32   NR UEP57879.1 630199 g41237 i0 67 6.97358490566038 88 29 99.6 0 264 1 44 131 UEP57879.1 putative 230 kDa polyprotein, partial [Grapevine Syrah virus 1] diamond 1848 129 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Marafivirus Marafivirus syrahense
27713176 27713176 PRJNA635874_P_NODE_33184_length_290_cov_1.419355_g33037_i0 PRJNA635874 33184 290 1.419355 4.1161295 Olive latent virus 3 626962 Viruses Viruses 124 1.99e-30   NR WQF62470.1 626962 g33037 i0 59.4 0.993103448275862 96 39 99.3 0 2 289 1028 1123 WQF62470.1 MAG: replicase [Olive latent virus 3] diamond 288 124 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Marafivirus Marafivirus oleae
27744630 27744630 PRJNA635874_P_NODE_1204_length_1032_cov_1.980188_g1101_i0 PRJNA635874 1204 1032 1.980188 20.43554016 Guiyang Paspalum paspaloides tymo-like virus 1 2970310 Viruses Viruses 274 5.77e-79   NR UUW20925.1 2970310 g1101 i0 52.1 0.837209302325581 288 128 83.7 3 3 866 1843 2120 UUW20925.1 MAG: methyltransferase [Guiyang Paspalum paspaloides tymo-like virus 1] diamond 864 274 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   Guiyang Paspalum paspaloides tymo-like virus 1
27776131 27776131 PRJNA635874_P_NODE_58244_length_247_cov_0.879310_g58097_i0 PRJNA635874 58244 247 0.87931 2.1718957 uncultured Caudovirales phage 2100421 Viruses Viruses 70.1 8.78e-12   NR CAB4241496.1 2100421 g58097 i0 41.8 0.959514170040486 79 46 96 0 237 1 30 108 CAB4241496.1 Myoviridae tail sheath stabiliser [uncultured Caudovirales phage] diamond 237 70.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
27851420 27851420 PRJNA635874_P_NODE_41324_length_265_cov_1.203125_g41177_i0 PRJNA635874 41324 265 1.203125 3.18828125 Gammaretrovirus 153135 Viruses Viruses 169 1.72e-46   NR NP_057933.2 11801 g41177 i0 96.6 12.9509433962264 88 3 99.6 0 265 2 1171 1258 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 3432 169 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
27933815 27933815 PRJNA635874_P_NODE_36805_length_279_cov_1.097087_g36658_i0 PRJNA635874 36805 279 1.097087 3.06087273 Caudoviricetes sp. 2832643 Viruses Viruses 112 1.9e-26   NR XOS19684.1 2832643 g36658 i0 63.9 0.89247311827957 83 30 89.2 0 4 252 238 320 XOS19684.1 MAG: putative tail fiber protein [Caudoviricetes sp.] diamond 249 112 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28754736 28754736 PRJNA635874_P_NODE_57947_length_247_cov_0.885057_g57800_i0 PRJNA635874 57947 247 0.885057 2.18609079 Prokaryotic dsDNA virus sp. 2591644 Viruses Viruses 67 1.87e-11   NR QDP48152.1 2591644 g57800 i0 45.1 0.862348178137652 71 37 85 2 241 32 109 178 QDP48152.1 MAG: hypothetical protein Unbinned6437contig1000_6 [Prokaryotic dsDNA virus sp.] diamond 213 67 1 Viruses               Prokaryotic dsDNA virus sp.
28767162 28767162 PRJNA635874_P_NODE_43067_length_260_cov_1.235294_g42920_i0 PRJNA635874 43067 260 1.235294 3.2117644 Marafivirus 12051 Viruses Viruses 48.1 5.97e-4   NR QQG34652.1 2794433 g42920 i0 33.3 3.98076923076923 90 50 99.2 3 1 258 961 1044 QQG34652.1 polyprotein [Davidia involucrata marafivirus 1] diamond 1035 48.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Marafivirus Davidia involucrata marafivirus 1
28849261 28849261 PRJNA635874_P_NODE_7488_length_523_cov_2.313333_g7342_i0 PRJNA635874 7488 523 2.313333 12.09873159 Guiyang Paspalum paspaloides tymo-like virus 1 2970310 Viruses Viruses 182 1.4e-49   NR UUW20925.1 2970310 g7342 i0 53.9 0.957934990439771 167 77 95.8 0 518 18 1105 1271 UUW20925.1 MAG: methyltransferase [Guiyang Paspalum paspaloides tymo-like virus 1] diamond 501 182 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   Guiyang Paspalum paspaloides tymo-like virus 1
29493422 29493422 PRJNA635874_P_NODE_36390_length_280_cov_1.323671_g36243_i0 PRJNA635874 36390 280 1.323671 3.7062788 Chuvivirus 2842604 Viruses Viruses 113 3.5e-27   NR WET19887.1 2842604 g36243 i0 62 1.97142857142857 92 35 98.6 0 277 2 255 346 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 552 113 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
29733269 29733269 PRJNA635874_P_NODE_19610_length_355_cov_1.457447_g19463_i0 PRJNA635874 19610 355 1.457447 5.17393685 Moloney murine leukemia virus 11801 Viruses Viruses 242 2.09e-71   NR NP_057933.2 11801 g19463 i0 100 5.9830985915493 118 0 99.7 0 355 2 1051 1168 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 2124 242 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30017902 30017902 PRJNA635874_P_NODE_70131_length_242_cov_0.911243_g69984_i0 PRJNA635874 70131 242 0.911243 2.20520806 Acinetobacter phage vB_AbaP_Acibel 2865959 Viruses Viruses 123 1.18e-32   NR YP_009103227.1 1481187 g69984 i0 67.5 0.991735537190083 80 26 99.2 0 3 242 28 107 YP_009103227.1 DNA primase [Acinetobacter phage vB_AbaP_Acibel007] diamond 240 123 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autoscriptoviridae Daemvirus Daemvirus acibel007
31376690 31376690 PRJNA635874_P_NODE_21716_length_342_cov_1.144981_g21569_i0 PRJNA635874 21716 342 1.144981 3.91583502 Escherichia phage Lambda 2681611 Viruses Viruses 71.2 8.07e-14   NR NP_040643.1 2681611 g21569 i0 46.9 0.56140350877193 64 34 56.1 0 205 14 1 64 NP_040643.1 hypothetical protein lambdap73 [Escherichia phage Lambda] diamond 192 71.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lambdavirus Lambdavirus lambda
31882524 31882524 PRJNA635874_P_NODE_26517_length_317_cov_1.618852_g26370_i0 PRJNA635874 26517 317 1.618852 5.13176084 Caudoviricetes sp. 2832643 Viruses Viruses 97.4 4.599999999999999e-24   NR XOR26773.1 2832643 g26370 i0 94 0.473186119873817 50 3 47.3 0 151 2 1 50 XOR26773.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 150 97.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32104101 32104101 PRJNA635874_P_NODE_3378_length_716_cov_3.256610_g3241_i0 PRJNA635874 3378 716 3.25661 23.3173276 Pseudomonas phage ER16 2917704 Viruses Viruses 49.3 3.44e-4   NR UNI73398.1 2917704 g3241 i0 34.8 0.289106145251397 69 45 28.9 0 242 36 1 69 UNI73398.1 hypothetical protein ER16_Large9 [Pseudomonas phage ER16] diamond 207 49.3 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Pseudomonas phage ER16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;