RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA635874" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA635874 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26922801 26922801 PRJNA635874_P_NODE_19062_length_359_cov_0.905594_g18915_i0 PRJNA635874 19062 359 0.905594 3.25108246 Sinanodonta woodiana 1069815 Mollusca Mollusca 47 0.00453   NR KAL3877911.1 1069815 g18915 i0 30.5 1.58774373259053 95 58 73.5 3 282 19 616 709 KAL3877911.1 hypothetical protein ACJMK2_035553 [Sinanodonta woodiana] diamond 570 47 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Sinanodonta Sinanodonta woodiana
27365755 27365755 PRJNA635874_P_NODE_48503_length_250_cov_1.305085_g48356_i0 PRJNA635874 48503 250 1.305085 3.2627125 Solemya velum 13268 Mollusca Mollusca 65.5 4.04e-10   NR KAL5022008.1 13268 g48356 i0 46.6 2.652 73 37 87.6 2 1 219 122 192 KAL5022008.1 hypothetical protein ScPMuIL_001163 [Solemya velum] diamond 663 65.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum
27554658 27554658 PRJNA635874_P_NODE_22184_length_339_cov_1.345865_g22037_i0 PRJNA635874 22184 339 1.345865 4.56248235 Acanthosepion pharaonis 158019 Mollusca Mollusca 93.2 8.56e-20   NR CAE1283158.1 158019 g22037 i0 39.8 1 113 59 100 2 1 339 103 206 CAE1283158.1 unnamed protein product [Acanthosepion pharaonis] diamond 339 93.2 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
28249382 28249382 PRJNA635874_P_NODE_73886_length_241_cov_0.916667_g73739_i0 PRJNA635874 73886 241 0.916667 2.20916747 Magallana gigas 29159 Mollusca Mollusca 119 4.98e-30   NR XP_011446138.3 29159 g73739 i0 69.6 2.95020746887967 79 24 98.3 0 239 3 302 380 XP_011446138.3 2-aminoethylphosphonate--pyruvate transaminase [Magallana gigas] diamond 711 119 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
28754722 28754722 PRJNA635874_P_NODE_30927_length_299_cov_1.022124_g30780_i0 PRJNA635874 30927 299 1.022124 3.05615076 Batillaria attramentaria 370345 Mollusca Mollusca 57.8 1.6e-7   NR KAK7498057.1 370345 g30780 i0 41.1 1.80602006688963 90 48 90.3 2 297 28 121 205 KAK7498057.1 hypothetical protein BaRGS_00010645 [Batillaria attramentaria] diamond 540 57.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Batillariidae Batillaria Batillaria attramentaria
29114596 29114596 PRJNA635874_P_NODE_44048_length_257_cov_1.255435_g43901_i0 PRJNA635874 44048 257 1.255435 3.22646795 Metazoa 33208 Mollusca Mollusca 50.4 8.26e-5   NR XP_021365239.1 6573 g43901 i0 75 3.1284046692607 28 7 32.7 0 58 141 187 214 XP_021365239.1 RCC1-like G exchanging factor-like protein isoform X2 [Mizuhopecten yessoensis] diamond 804 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
30807708 30807708 PRJNA635874_P_NODE_51374_length_249_cov_0.875000_g51227_i0 PRJNA635874 51374 249 0.875 2.17875 Pomacea canaliculata 400727 Mollusca Mollusca 51.6 2.97e-5   NR XP_025085556.1 400727 g51227 i0 41.5 2.91566265060241 82 48 98.8 0 3 248 486 567 XP_025085556.1 kinesin-like protein KIF3A isoform X3 [Pomacea canaliculata] diamond 726 51.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
30997297 30997297 PRJNA635874_P_NODE_31414_length_297_cov_1.191964_g31267_i0 PRJNA635874 31414 297 1.191964 3.54013308 Octopus sinensis 2607531 Mollusca Mollusca 47.8 3.17e-4   NR XP_029636397.1 2607531 g31267 i0 30.3 0.767676767676768 76 53 76.8 0 16 243 1 76 XP_029636397.1 ubiquitin-60S ribosomal protein L40 [Octopus sinensis] diamond 228 47.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
31186545 31186545 PRJNA635874_P_NODE_47975_length_251_cov_0.865169_g47828_i0 PRJNA635874 47975 251 0.865169 2.17157419 Ruditapes philippinarum 129788 Mollusca Mollusca 75.1 1.32e-13   NR XP_060579328.1 129788 g47828 i0 51.2 3.25099601593626 82 33 92 3 15 245 269 348 XP_060579328.1 UPF0046 protein C25E10.12-like [Ruditapes philippinarum] diamond 816 75.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
31218038 31218038 PRJNA635874_P_NODE_57615_length_247_cov_0.885057_g57468_i0 PRJNA635874 57615 247 0.885057 2.18609079 Pomacea canaliculata 400727 Mollusca Mollusca 103 8.06e-25   NR PVD22824.1 400727 g57468 i0 61.7 0.983805668016194 81 31 98.4 0 243 1 25 105 PVD22824.1 hypothetical protein C0Q70_16080 [Pomacea canaliculata] diamond 243 103 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
31357552 31357552 PRJNA635874_P_NODE_49496_length_250_cov_0.870056_g49349_i0 PRJNA635874 49496 250 0.870056 2.17514 Mollusca 6447 Mollusca Mollusca 53.1 8.55e-6   NR XP_022332114.1 6565 g49349 i0 40.8 1.68 71 39 81.6 1 228 25 153 223 XP_022332114.1 ribosome biogenesis protein NOP53-like isoform X1 [Crassostrea virginica] diamond 420 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
32842913 32842913 PRJNA635874_P_NODE_50120_length_250_cov_0.870056_g49973_i0 PRJNA635874 50120 250 0.870056 2.17514 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47 3.13e-4   NR KAL5016484.1 13268 g49973 i0 45.8 6.12 59 23 60 1 2 151 46 104 KAL5016484.1 hypothetical protein ScPMuIL_006073 [Solemya velum] diamond 1530 47 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;