RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA635874" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA635874 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31914298 31914298 PRJNA635874_P_NODE_44937_length_254_cov_1.690608_g44790_i0 PRJNA635874 44937 254 1.6906080000000001 4.29414432 Ignavibacteria bacterium 2053306 Bacteria Bacteria 121 5.009999999999999e-32   NR MBK7988717.1 2053306 g44790 i0 95 0.708661417322835 60 3 70.9 0 254 75 187 246 MBK7988717.1 ribonuclease H-like domain-containing protein [Ignavibacteria bacterium] diamond 180 121 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32199125 32199125 PRJNA635874_P_NODE_60358_length_246_cov_0.890173_g60211_i0 PRJNA635874 60358 246 0.890173 2.18982558 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 43.9 0.0153   NR HRI46078.1 2651163 g60211 i0 33.3 0.658536585365854 54 36 65.9 0 7 168 287 340 HRI46078.1 T9SS type A sorting domain-containing protein [Ignavibacteriaceae bacterium] diamond 162 43.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;