contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA635874" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8261475 | 8261475 | PRJNA635874_P_NODE_71207_length_242_cov_0.911243_g71060_i0 | PRJNA635874 | 71207 | 242 | 0.911243 | 2.20520806 | Bdellovibrio svalbardensis | 2972972 | Bacteria | Bacteria | 98.6 | 2.19e-23 | NR | WP_277578550.1 | 2972972 | g71060 | i0 | 58.2 | 1.95867768595041 | 79 | 33 | 97.9 | 0 | 240 | 4 | 94 | 172 | WP_277578550.1 YggS family pyridoxal phosphate-dependent enzyme [Bdellovibrio svalbardensis] | diamond | 474 | 98.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio svalbardensis | ||
| 22284536 | 22284536 | PRJNA635874_P_NODE_38638_length_273_cov_1.255000_g38491_i0 | PRJNA635874 | 38638 | 273 | 1.255 | 3.42615 | Bacteriovoracia bacterium | 3058048 | Bacteria | Bacteria | 92 | 6.91e-20 | NR | MFP5384796.1 | 3058048 | g38491 | i0 | 55.9 | 2.17582417582418 | 68 | 30 | 74.7 | 0 | 271 | 68 | 252 | 319 | MFP5384796.1 polyhydroxybutyrate depolymerase [Bacteriovoracia bacterium] | diamond | 594 | 92 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracia bacterium | |||||
| 28167394 | 28167394 | PRJNA635874_P_NODE_73965_length_241_cov_0.916667_g73818_i0 | PRJNA635874 | 73965 | 241 | 0.916667 | 2.20916747 | Bacteria | 2 | Bacteria | Bacteria | 101 | 7.84e-24 | NR | MAV91743.1 | 2026715 | g73818 | i0 | 49.4 | 1.96680497925311 | 79 | 40 | 98.3 | 0 | 239 | 3 | 123 | 201 | MAV91743.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] | diamond | 474 | 101 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 28344236 | 28344236 | PRJNA635874_P_NODE_53566_length_248_cov_0.880000_g53419_i0 | PRJNA635874 | 53566 | 248 | 0.88 | 2.1824 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 77.4 | 2.43e-14 | NR | HAG92065.1 | 2053517 | g53419 | i0 | 43.7 | 1.05241935483871 | 87 | 44 | 99.2 | 2 | 1 | 246 | 66 | 152 | HAG92065.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 261 | 77.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28596985 | 28596985 | PRJNA635874_P_NODE_61647_length_245_cov_0.895349_g61500_i0 | PRJNA635874 | 61647 | 245 | 0.895349 | 2.19360505 | Bdellovibrio sp. HCB2-146 | 3394362 | Bacteria | Bacteria | 143 | 1.61e-37 | NR | WP_413940527.1 | 3394362 | g61500 | i0 | 86.1 | 0.96734693877551 | 79 | 11 | 96.7 | 0 | 2 | 238 | 291 | 369 | WP_413940527.1 transglycosylase domain-containing protein [Bdellovibrio sp. HCB2-146] | diamond | 237 | 143 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB2-146 | ||
| 28660137 | 28660137 | PRJNA635874_P_NODE_53947_length_248_cov_0.880000_g53800_i0 | PRJNA635874 | 53947 | 248 | 0.88 | 2.1824 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 82 | 5.74e-16 | NR | HEY8279360.1 | 3034175 | g53800 | i0 | 80.4 | 1.23387096774194 | 51 | 10 | 61.7 | 0 | 248 | 96 | 525 | 575 | HEY8279360.1 arginine--tRNA ligase [Bdellovibrionota bacterium] | diamond | 306 | 82 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 30744533 | 30744533 | PRJNA635874_P_NODE_51534_length_249_cov_0.875000_g51387_i0 | PRJNA635874 | 51534 | 249 | 0.875 | 2.17875 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 56.6 | 5.24e-7 | NR | MFN8790833.1 | 2053517 | g51387 | i0 | 64.9 | 0.44578313253012 | 37 | 13 | 44.6 | 0 | 13 | 123 | 158 | 194 | MFN8790833.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 111 | 56.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31073013 | 31073013 | PRJNA635874_P_NODE_55375_length_248_cov_0.880000_g55228_i0 | PRJNA635874 | 55375 | 248 | 0.88 | 2.1824 | Micavibrio | 213485 | Bacteria | Bacteria | 68.9 | 2.3e-11 | NR | PZO79293.1 | 349221 | g55228 | i0 | 49.3 | 2.58870967741935 | 69 | 33 | 83.5 | 1 | 10 | 216 | 383 | 449 | PZO79293.1 MAG: hypothetical protein DI626_11630 [Micavibrio aeruginosavorus] | diamond | 642 | 68.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 31629640 | 31629640 | PRJNA635874_P_NODE_13416_length_412_cov_1.197640_g13269_i0 | PRJNA635874 | 13416 | 412 | 1.19764 | 4.9342768 | Silvanigrellaceae bacterium | 2654442 | Bacteria | Bacteria | 132 | 4.9e-37 | NR | MBX9702949.1 | 2654442 | g13269 | i0 | 70.8 | 0.699029126213592 | 96 | 27 | 69.9 | 1 | 3 | 290 | 28 | 122 | MBX9702949.1 hypothetical protein [Silvanigrellaceae bacterium] | diamond | 288 | 132 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 31692828 | 31692828 | PRJNA635874_P_NODE_72217_length_241_cov_0.916667_g72070_i0 | PRJNA635874 | 72217 | 241 | 0.916667 | 2.20916747 | Oligoflexales bacterium | 2687297 | Bacteria | Bacteria | 43.5 | 0.0177 | NR | MFK7872243.1 | 2687297 | g72070 | i0 | 37.1 | 0.871369294605809 | 70 | 41 | 85.9 | 2 | 8 | 214 | 6 | 73 | MFK7872243.1 enoyl-ACP reductase [Oligoflexales bacterium] | diamond | 210 | 43.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexales bacterium | ||||
| 32116749 | 32116749 | PRJNA635874_P_NODE_35698_length_282_cov_1.473684_g35551_i0 | PRJNA635874 | 35698 | 282 | 1.473684 | 4.15578888 | Halobacteriovorax | 1652133 | Bacteria | Bacteria | 128 | 3.84e-33 | NR | WP_096910288.1 | 97084 | g35551 | i0 | 63 | 1.96808510638298 | 92 | 34 | 97.9 | 0 | 277 | 2 | 219 | 310 | WP_096910288.1 trans-sulfuration enzyme family protein [Halobacteriovorax marinus] | diamond | 555 | 128 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovorax | Halobacteriovorax marinus | ||
| 32167614 | 32167614 | PRJNA635874_P_NODE_40658_length_267_cov_1.190722_g40511_i0 | PRJNA635874 | 40658 | 267 | 1.190722 | 3.17922774 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 85.5 | 1.23e-18 | NR | WP_324954760.1 | 1971216 | g40511 | i0 | 68.4 | 0.640449438202247 | 57 | 18 | 64 | 0 | 53 | 223 | 94 | 150 | WP_324954760.1 hypothetical protein [Oligoflexus sp.] | diamond | 171 | 85.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 32483954 | 32483954 | PRJNA635874_P_NODE_44939_length_254_cov_1.685083_g44792_i0 | PRJNA635874 | 44939 | 254 | 1.685083 | 4.28011082 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 43.5 | 0.0228 | NR | WP_253715556.1 | 959 | g44792 | i0 | 36 | 0.885826771653543 | 75 | 40 | 88.6 | 1 | 12 | 236 | 389 | 455 | WP_253715556.1 BatD family protein [Bdellovibrio bacteriovorus] | diamond | 225 | 43.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;