RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA635874" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 10 ✖

bioproject 1

  • PRJNA635874 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18459071 18459071 PRJNA635874_P_NODE_19935_length_353_cov_1.100000_g19788_i0 PRJNA635874 19935 353 1.1 3.883 Caudoviricetes sp. 2832643 Viruses Viruses 185 1.04e-53   NR XOS43889.1 2832643 g19788 i0 75.9 1.87818696883853 116 28 98.6 0 5 352 97 212 XOS43889.1 MAG: phage protein [Caudoviricetes sp.] diamond 663 185 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26637749 26637749 PRJNA635874_P_NODE_58741_length_246_cov_0.890173_g58594_i0 PRJNA635874 58741 246 0.890173 2.18982558 Campylobacter phage CJLB-4 2781358 Viruses Viruses 67.4 1.66e-12   NR QPB10280.1 2781358 g58594 i0 62.3 0.646341463414634 53 20 64.6 0 231 73 37 89 QPB10280.1 hypothetical protein [Campylobacter phage CJLB-4] diamond 159 67.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lambdavirus Campylobacter phage CJLB-4
26732445 26732445 PRJNA635874_P_NODE_9241_length_479_cov_1.546798_g9094_i0 PRJNA635874 9241 479 1.546798 7.40916242 Caudoviricetes sp. 2832643 Viruses Viruses 112 9.32e-29   NR DAH93386.1 2832643 g9094 i0 62.4 0.532359081419624 85 32 53.2 0 256 2 1 85 DAH93386.1 MAG TPA: hypothetical protein, partial [Caudoviricetes sp.] diamond 255 112 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26859841 26859841 PRJNA635874_P_NODE_62761_length_245_cov_0.895349_g62614_i0 PRJNA635874 62761 245 0.895349 2.19360505 Stenotrophomonas phage Silvanus 2859659 Viruses Viruses 81.6 7.76e-16   NR QYW02488.1 2859659 g62614 i0 62.8 0.955102040816327 78 29 95.5 0 236 3 803 880 QYW02488.1 tape measure protein [Stenotrophomonas phage Silvanus] diamond 234 81.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Stenotrophomonas phage Silvanus
27365763 27365763 PRJNA635874_P_NODE_64003_length_244_cov_0.900585_g63856_i0 PRJNA635874 64003 244 0.900585 2.1974274 Staphylococcus phage S-CoN_Ph17 3076573 Viruses Viruses 149 4.729999999999999e-42   NR WNM54416.1 3076573 g63856 i0 92.5 2.95081967213115 80 6 98.4 0 241 2 61 140 WNM54416.1 portal protein [Staphylococcus phage S-CoN_Ph17] diamond 720 149 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Sextaecvirus Staphylococcus phage S-CoN_Ph17
27776131 27776131 PRJNA635874_P_NODE_58244_length_247_cov_0.879310_g58097_i0 PRJNA635874 58244 247 0.87931 2.1718957 uncultured Caudovirales phage 2100421 Viruses Viruses 70.1 8.78e-12   NR CAB4241496.1 2100421 g58097 i0 41.8 0.959514170040486 79 46 96 0 237 1 30 108 CAB4241496.1 Myoviridae tail sheath stabiliser [uncultured Caudovirales phage] diamond 237 70.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
27933815 27933815 PRJNA635874_P_NODE_36805_length_279_cov_1.097087_g36658_i0 PRJNA635874 36805 279 1.097087 3.06087273 Caudoviricetes sp. 2832643 Viruses Viruses 112 1.9e-26   NR XOS19684.1 2832643 g36658 i0 63.9 0.89247311827957 83 30 89.2 0 4 252 238 320 XOS19684.1 MAG: putative tail fiber protein [Caudoviricetes sp.] diamond 249 112 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30017902 30017902 PRJNA635874_P_NODE_70131_length_242_cov_0.911243_g69984_i0 PRJNA635874 70131 242 0.911243 2.20520806 Acinetobacter phage vB_AbaP_Acibel 2865959 Viruses Viruses 123 1.18e-32   NR YP_009103227.1 1481187 g69984 i0 67.5 0.991735537190083 80 26 99.2 0 3 242 28 107 YP_009103227.1 DNA primase [Acinetobacter phage vB_AbaP_Acibel007] diamond 240 123 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autoscriptoviridae Daemvirus Daemvirus acibel007
31376690 31376690 PRJNA635874_P_NODE_21716_length_342_cov_1.144981_g21569_i0 PRJNA635874 21716 342 1.144981 3.91583502 Escherichia phage Lambda 2681611 Viruses Viruses 71.2 8.07e-14   NR NP_040643.1 2681611 g21569 i0 46.9 0.56140350877193 64 34 56.1 0 205 14 1 64 NP_040643.1 hypothetical protein lambdap73 [Escherichia phage Lambda] diamond 192 71.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Lambdavirus Lambdavirus lambda
31882524 31882524 PRJNA635874_P_NODE_26517_length_317_cov_1.618852_g26370_i0 PRJNA635874 26517 317 1.618852 5.13176084 Caudoviricetes sp. 2832643 Viruses Viruses 97.4 4.599999999999999e-24   NR XOR26773.1 2832643 g26370 i0 94 0.473186119873817 50 3 47.3 0 151 2 1 50 XOR26773.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 150 97.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;