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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA635874" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 32 ✖

bioproject 1

  • PRJNA635874 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5710927 5710927 PRJNA635874_P_NODE_3065_length_743_cov_1.926866_g2931_i0 PRJNA635874 3065 743 1.926866 14.31661438 root 1 Root_unresolved Root_unresolved 392 3.14e-132   NR KAI8462989.1 39955 g2931 i0 74.9 13.9582772543742 247 61 99.7 1 742 2 121 366 KAI8462989.1 MAG: Adenosylhomocysteinase [Monoraphidium minutum] diamond 10371 392 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
7532435 7532435 PRJNA635874_P_NODE_4346_length_652_cov_2.865285_g4204_i0 PRJNA635874 4346 652 2.865285 18.6816582 Sanguina aurantia 2578422 Plants Plants 91.3 8.74e-20   NR MEW5304161.1 2578422 g4204 i0 50.9 1.49539877300613 110 52 50.6 1 17 346 1 108 MEW5304161.1 hypothetical protein [Sanguina aurantia] diamond 975 91.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
8260996 8260996 PRJNA635874_P_NODE_49707_length_250_cov_0.870056_g49560_i0 PRJNA635874 49707 250 0.870056 2.17514 Eukaryota 2759 Plants Plants 82.4 4.42e-16   NR XP_005645678.1 574566 g49560 i0 61.7 5.772 60 23 72 0 184 5 558 617 XP_005645678.1 SSrecog-domain-containing protein [Coccomyxa subellipsoidea C-169] diamond 1443 82.8 0.995169082125604 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
9536325 9536325 PRJNA635874_P_NODE_51588_length_249_cov_0.875000_g51441_i0 PRJNA635874 51588 249 0.875 2.17875 Chlorophyta 3041 Plants Plants 131 2.02e-34   NR ALM54987.1 309537 g51441 i0 73.5 10 83 22 100 0 249 1 155 237 ALM54987.1 DEAD box RNA helicase CiRH12, partial [Chlamydomonas sp. ICE-L] diamond 2490 131 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. ICE-L
12086684 12086684 PRJNA635874_P_NODE_31950_length_295_cov_1.094595_g31803_i0 PRJNA635874 31950 295 1.094595 3.22905525 Trebouxia sp. C 2796353 Plants Plants 73.9 1.38e-14   NR KAL0042167.1 2905653 g31803 i0 55.7 1.28135593220339 61 26 61 1 18 197 5 65 KAL0042167.1 hypothetical protein WJX77_005300 [Trebouxia sp. C0004] diamond 378 73.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
26827957 26827957 PRJNA635874_P_NODE_69861_length_242_cov_0.911243_g69714_i0 PRJNA635874 69861 242 0.911243 2.20520806 Tetradesmus obliquus 3088 Plants Plants 90.1 4.31e-19   NR WIA36294.1 3088 g69714 i0 82.7 1.93388429752066 52 9 64.5 0 157 2 170 221 WIA36294.1 hypothetical protein OEZ86_007619 [Tetradesmus obliquus] diamond 468 90.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
26922830 26922830 PRJNA635874_P_NODE_66702_length_243_cov_0.905882_g66555_i0 PRJNA635874 66702 243 0.905882 2.20129326 Coccomyxa viridis 1274662 Plants Plants 162 1.11e-45   NR CAL5224774.1 1274662 g66555 i0 93.8 3.95061728395062 80 5 98.8 0 241 2 215 294 CAL5224774.1 g7514 [Coccomyxa viridis] diamond 960 162 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
27112455 27112455 PRJNA635874_P_NODE_7822_length_515_cov_1.092760_g7676_i0 PRJNA635874 7822 515 1.09276 5.627714 Pedinophyceae sp. YPF-7 765719 Plants Plants 117 4.93e-30   NR CAG9462620.1 765719 g7676 i0 77.6 0.780582524271845 67 15 39 0 510 310 25 91 CAG9462620.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 402 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
27270574 27270574 PRJNA635874_P_NODE_61843_length_245_cov_0.895349_g61696_i0 PRJNA635874 61843 245 0.895349 2.19360505 Symbiochloris irregularis 706552 Plants Plants 147 5.97e-41   NR KAK9792257.1 706552 g61696 i0 90.1 0.991836734693878 81 8 99.2 0 243 1 28 108 KAK9792257.1 hypothetical protein WJX73_010371 [Symbiochloris irregularis] diamond 243 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
27428880 27428880 PRJNA635874_P_NODE_50063_length_250_cov_0.870056_g49916_i0 PRJNA635874 50063 250 0.870056 2.17514 Coccomyxa subellipsoidea C-169 574566 Plants Plants 90.9 4.5e-21   NR XP_005649772.1 574566 g49916 i0 100 1.476 41 0 49.2 0 125 3 1 41 XP_005649772.1 ubiquitin-conjugating enzyme [Coccomyxa subellipsoidea C-169] diamond 369 90.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27713194 27713194 PRJNA635874_P_NODE_70144_length_242_cov_0.911243_g69997_i0 PRJNA635874 70144 242 0.911243 2.20520806 Symbiochloris irregularis 706552 Plants Plants 46.2 0.00223   NR KAK9806474.1 706552 g69997 i0 41.3 0.570247933884298 46 27 57 0 240 103 226 271 KAK9806474.1 hypothetical protein WJX73_000984 [Symbiochloris irregularis] diamond 138 46.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
27757094 27757094 PRJNA635874_P_NODE_41264_length_265_cov_1.484375_g41117_i0 PRJNA635874 41264 265 1.484375 3.93359375 Eukaryota 2759 Plants Plants 107 8.44e-28   NR KAK2076791.1 3111 g41117 i0 70.6 6.97358490566038 68 20 77 0 263 60 41 108 KAK2076791.1 iso-1-cytochrome c [Prototheca wickerhamii] diamond 1848 107 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
28325094 28325094 PRJNA635874_P_NODE_62826_length_245_cov_0.895349_g62679_i0 PRJNA635874 62826 245 0.895349 2.19360505 Coccomyxa 41891 Plants Plants 53.5 6.08e-6   NR XP_005643884.1 574566 g62679 i0 59 1.35918367346939 39 16 47.8 0 118 2 1025 1063 XP_005643884.1 hypothetical protein COCSUDRAFT_44691 [Coccomyxa subellipsoidea C-169] diamond 333 53.9 0.992578849721707 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
28407474 28407474 PRJNA635874_P_NODE_57326_length_247_cov_0.885057_g57179_i0 PRJNA635874 57326 247 0.885057 2.18609079 Coccomyxa viridis 1274662 Plants Plants 96.3 2.29e-21   NR CAK0758738.1 1274662 g57179 i0 91.8 0.595141700404858 49 4 59.5 0 1 147 331 379 CAK0758738.1 hypothetical protein CVIRNUC_002643 [Coccomyxa viridis] diamond 147 96.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
28502191 28502191 PRJNA635874_P_NODE_52287_length_249_cov_0.875000_g52140_i0 PRJNA635874 52287 249 0.875 2.17875 Coccomyxa elongata 1965095 Plants Plants 79.3 1.87e-15   NR CAL8467676.1 1965095 g52140 i0 47.9 2.63855421686747 73 38 88 0 28 246 200 272 CAL8467676.1 g7214 [Coccomyxa elongata] diamond 657 79.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
28735652 28735652 PRJNA635874_P_NODE_67487_length_243_cov_0.905882_g67340_i0 PRJNA635874 67487 243 0.905882 2.20129326 Chlorellaceae 35461 Plants Plants 74.3 6.64e-15   NR KAK2076587.1 3111 g67340 i0 84.6 1.46913580246914 39 6 48.1 0 2 118 83 121 KAK2076587.1 Nuclear transport factor 2B [Prototheca wickerhamii] diamond 357 74.7 0.994645247657296 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29303929 29303929 PRJNA635874_P_NODE_72469_length_241_cov_0.916667_g72322_i0 PRJNA635874 72469 241 0.916667 2.20916747 Scenedesmaceae 3086 Plants Plants 157 7.749999999999998e-47   NR WIA22966.1 3088 g72322 i0 88.6 1.96680497925311 79 9 98.3 0 239 3 94 172 WIA22966.1 hypothetical protein OEZ85_001327 [Tetradesmus obliquus] diamond 474 157 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29386354 29386354 PRJNA635874_P_NODE_63029_length_245_cov_0.895349_g62882_i0 PRJNA635874 63029 245 0.895349 2.19360505 Coccomyxa viridis 1274662 Plants Plants 147 3.65e-39   NR CAK0785192.1 1274662 g62882 i0 97.5 1.98367346938776 81 2 99.2 0 244 2 424 504 CAK0785192.1 hypothetical protein CVIRNUC_008398 [Coccomyxa viridis] diamond 486 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
29575441 29575441 PRJNA635874_P_NODE_47830_length_251_cov_0.865169_g47683_i0 PRJNA635874 47830 251 0.865169 2.17157419 Symbiochloris irregularis 706552 Plants Plants 99 6.88e-22   NR KAK9812410.1 706552 g47683 i0 72 0.9800796812749 82 22 96.8 1 3 245 479 560 KAK9812410.1 hypothetical protein WJX73_008775 [Symbiochloris irregularis] diamond 246 99 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
30175673 30175673 PRJNA635874_P_NODE_48632_length_250_cov_0.870056_g48485_i0 PRJNA635874 48632 250 0.870056 2.17514 Auxenochlorella protothecoides 3075 Plants Plants 87.8 5.69e-18   NR XP_011401284.1 3075 g48485 i0 56.5 1.656 69 30 82.8 0 7 213 627 695 XP_011401284.1 hypothetical protein F751_1549 [Auxenochlorella protothecoides] diamond 414 87.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30175681 30175681 PRJNA635874_P_NODE_69672_length_242_cov_0.911243_g69525_i0 PRJNA635874 69672 242 0.911243 2.20520806 Symbiochloris irregularis 706552 Plants Plants 99.8 2.41e-22   NR KAK9795851.1 706552 g69525 i0 65.2 2.45454545454545 66 23 81.8 0 4 201 230 295 KAK9795851.1 hypothetical protein WJX73_005153 [Symbiochloris irregularis] diamond 594 99.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
30188144 30188144 PRJNA635874_P_NODE_47732_length_251_cov_0.865169_g47585_i0 PRJNA635874 47732 251 0.865169 2.17157419 Coccomyxa 41891 Plants Plants 79 7.29e-15   NR CAL8469839.1 1965095 g47585 i0 54.3 4.35059760956175 70 29 83.7 1 212 3 214 280 CAL8469839.1 g9381 [Coccomyxa elongata] diamond 1092 79 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
30188145 30188145 PRJNA635874_P_NODE_70572_length_242_cov_0.911243_g70425_i0 PRJNA635874 70572 242 0.911243 2.20520806 Viridiplantae 33090 Plants Plants 104 4.92e-24   NR KXZ45826.1 33097 g70425 i0 60 6.94214876033058 80 21 99.2 1 242 3 256 324 KXZ45826.1 hypothetical protein GPECTOR_50g620 [Gonium pectorale] diamond 1680 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
30315129 30315129 PRJNA635874_P_NODE_29312_length_305_cov_1.568966_g29165_i0 PRJNA635874 29312 305 1.568966 4.7853463 root 1 Root_unresolved Root_unresolved 123 3.22e-30   NR CAG9467028.1 765719 g29165 i0 57.7 7.65245901639344 97 41 95.4 0 293 3 612 708 CAG9467028.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 2334 123 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
30334183 30334183 PRJNA635874_P_NODE_49612_length_250_cov_0.870056_g49465_i0 PRJNA635874 49612 250 0.870056 2.17514 [Myrmecia] bisecta 41462 Plants Plants 43.5 0.0187   NR KAK9804753.1 41462 g49465 i0 48.3 3.54 60 31 72 0 212 33 11 70 KAK9804753.1 hypothetical protein WJX72_003546 [[Myrmecia] bisecta] diamond 885 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
30744538 30744538 PRJNA635874_P_NODE_57774_length_247_cov_0.885057_g57627_i0 PRJNA635874 57774 247 0.885057 2.18609079 Picochlorum sp. SENEW3 1470871 Plants Plants 45.4 0.00247   NR WPT16836.1 1470871 g57627 i0 43.6 1.51821862348178 55 31 66.8 0 247 83 106 160 WPT16836.1 hypothetical protein PSENEW3_00004844 [Picochlorum sp. SENEW3] diamond 375 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
31154891 31154891 PRJNA635874_P_NODE_72755_length_241_cov_0.916667_g72608_i0 PRJNA635874 72755 241 0.916667 2.20916747 Symbiochloris irregularis 706552 Plants Plants 155 4.98e-45   NR KAK9804943.1 706552 g72608 i0 92.4 0.983402489626556 79 6 98.3 0 3 239 61 139 KAK9804943.1 hypothetical protein WJX73_001452 [Symbiochloris irregularis] diamond 237 155 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
31376708 31376708 PRJNA635874_P_NODE_62716_length_245_cov_0.895349_g62569_i0 PRJNA635874 62716 245 0.895349 2.19360505 [Myrmecia] bisecta 41462 Plants Plants 96.3 1.3e-21   NR KAK9803601.1 41462 g62569 i0 54.3 2.84081632653061 81 37 99.2 0 1 243 49 129 KAK9803601.1 hypothetical protein WJX72_003928 [[Myrmecia] bisecta] diamond 696 96.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
31945725 31945725 PRJNA635874_P_NODE_13857_length_406_cov_1.849850_g13710_i0 PRJNA635874 13857 406 1.84985 7.510391 Chlamydomonas eustigma 1157962 Plants Plants 173 6.339999999999999e-52   NR GAX77325.1 1157962 g13710 i0 66.2 1.96551724137931 133 45 98.3 0 404 6 72 204 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 798 173 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
31945750 31945750 PRJNA635874_P_NODE_51117_length_249_cov_0.875000_g50970_i0 PRJNA635874 51117 249 0.875 2.17875 Symbiochloris irregularis 706552 Plants Plants 70.1 9.22e-12   NR KAK9791583.1 706552 g50970 i0 76.9 0.626506024096386 52 12 62.7 0 157 2 319 370 KAK9791583.1 hypothetical protein WJX73_003017 [Symbiochloris irregularis] diamond 156 70.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
32262618 32262618 PRJNA635874_P_NODE_26578_length_317_cov_1.262295_g26431_i0 PRJNA635874 26578 317 1.262295 4.00147515 Chlamydomonas eustigma 1157962 Plants Plants 64.7 1.71e-9   NR GAX83935.1 1157962 g26431 i0 51.9 2.72555205047319 54 25 51.1 1 174 13 504 556 GAX83935.1 hypothetical protein CEUSTIGMA_g11359.t1 [Chlamydomonas eustigma] diamond 864 64.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
32862058 32862058 PRJNA635874_P_NODE_53040_length_249_cov_0.875000_g52893_i0 PRJNA635874 53040 249 0.875 2.17875 Coccomyxa sp. Obi 2315456 Plants Plants 62.4 4.73e-9   NR BDA45283.1 2315456 g52893 i0 43.9 1.97590361445783 82 41 98.8 1 248 3 196 272 BDA45283.1 Transcription factor 25 [Coccomyxa sp. Obi] diamond 492 62.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;