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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA635397" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA635397 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
605853 605853 PRJNA635397_P_NODE_37921_length_256_cov_1.972678_g37467_i0 PRJNA635397 37921 256 1.972678 5.05005568 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 141 1.68e-37   NR DAZ92832.1 4803 g37467 i0 81 14.8125 84 16 98.4 0 1 252 337 420 DAZ92832.1 TPA: hypothetical protein N0F65_009634 [Lagenidium giganteum] diamond 3792 142 0.992957746478873 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
1882110 1882110 PRJNA635397_P_NODE_38722_length_253_cov_2.694444_g38268_i0 PRJNA635397 38722 253 2.694444 6.81694332 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 6.6e-25   NR XP_067823359.1 4779 g38268 i0 67.9 4.83794466403162 81 22 96 1 243 1 1 77 XP_067823359.1 hypothetical protein CCR75_000035 [Bremia lactucae] diamond 1224 108 0.990740740740741 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
3156404 3156404 PRJNA635397_P_NODE_16683_length_402_cov_1.802432_g16229_i0 PRJNA635397 16683 402 1.802432 7.24577664 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 190 8.47e-58   NR GLD92140.1 114742 g16229 i0 72.3 5.83582089552239 130 36 97 0 394 5 24 153 GLD92140.1 hypothetical protein PINS_up000673 [Pythium insidiosum] diamond 2346 191 0.994764397905759 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
6984419 6984419 PRJNA635397_P_NODE_41526_length_249_cov_0.880682_g41072_i0 PRJNA635397 41526 249 0.880682 2.19289818 root 1 Root_unresolved Root_unresolved 135 8.49e-35   NR TMW56506.1 41045 g41072 i0 80.5 16.7951807228916 82 16 98.8 0 248 3 128 209 TMW56506.1 hypothetical protein Poli38472_006516 [Pythium oligandrum] diamond 4182 136 0.992647058823529 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
15908301 15908301 PRJNA635397_P_NODE_15493_length_421_cov_1.603448_g15039_i0 PRJNA635397 15493 421 1.603448 6.75051608 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 200 2.1e-58   NR RHY18699.1 112090 g15039 i0 71 7.90973871733967 138 40 98.3 0 8 421 129 266 RHY18699.1 hypothetical protein DYB36_010452, partial [Aphanomyces astaci] diamond 3330 201 0.995024875621891 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
18457724 18457724 PRJNA635397_P_NODE_2375_length_1307_cov_13.503241_g2129_i0 PRJNA635397 2375 1307 13.503241 176.48735987 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 576 4.16e-203   NR TMW60420.1 41045 g2129 i0 72.2 4.45524100994644 388 107 89.1 1 1280 117 1 387 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 5823 580 0.993103448275862 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
18457939 18457939 PRJNA635397_P_NODE_36895_length_260_cov_1.668449_g36441_i0 PRJNA635397 36895 260 1.668449 4.3379674 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 117 8.22e-29   NR KAG1705443.1 4784 g36441 i0 68.6 7.92692307692308 86 27 99.2 0 3 260 377 462 KAG1705443.1 T-complex protein 1 subunit beta [Phytophthora capsici] diamond 2061 117 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
27112408 27112408 PRJNA635397_P_NODE_21042_length_351_cov_1.255396_g20588_i0 PRJNA635397 21042 351 1.255396 4.40643996 Phytophthora citrophthora 4793 SAR_Eukaryotes SAR_Eukaryotes 144 4.91e-39   NR KAK1940843.1 4793 g20588 i0 57.8 5.88888888888889 116 49 99.1 0 349 2 200 315 KAK1940843.1 N-ethylmaleimide reductase [Phytophthora citrophthora] diamond 2067 144 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
27156312 27156312 PRJNA635397_P_NODE_38942_length_253_cov_1.233333_g38488_i0 PRJNA635397 38942 253 1.233333 3.12033249 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 143 2.13e-37   NR XP_024585020.1 4781 g38488 i0 79.5 26.5731225296443 83 17 98.4 0 5 253 222 304 XP_024585020.1 ap-4 complex subunit [Plasmopara halstedii] diamond 6723 144 0.993055555555556 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
27238910 27238910 PRJNA635397_P_NODE_37043_length_259_cov_3.182796_g36589_i0 PRJNA635397 37043 259 3.182796 8.24344164 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 93.6 6.77e-22   NR TYZ64398.1 1485010 g36589 i0 47.1 4.78378378378378 87 40 93.8 1 252 10 77 163 TYZ64398.1 hypothetical protein PybrP1_012361 [[Pythium] brassicae (nom. inval.)] diamond 1239 93.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
27586546 27586546 PRJNA635397_P_NODE_6524_length_727_cov_3.721713_g6095_i0 PRJNA635397 6524 727 3.721713 27.05685351 Phytophthora lilii 2077276 SAR_Eukaryotes SAR_Eukaryotes 59.3 2.62e-6   NR GMF15501.1 2077276 g6095 i0 39.7 0.602475928473177 146 60 58.6 5 690 265 36 157 GMF15501.1 unnamed protein product [Phytophthora lilii] diamond 438 59.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lilii
27618179 27618179 PRJNA635397_P_NODE_41824_length_248_cov_1.702857_g41370_i0 PRJNA635397 41824 248 1.702857 4.22308536 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 76.3 3.01e-16   NR TYZ62340.1 1485010 g41370 i0 90 0.967741935483871 40 4 48.4 0 246 127 27 66 TYZ62340.1 hypothetical protein PybrP1_000208 [[Pythium] brassicae (nom. inval.)] diamond 240 76.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
27870517 27870517 PRJNA635397_P_NODE_23085_length_333_cov_2.623077_g22631_i0 PRJNA635397 23085 333 2.623077 8.73484641 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 153 1.4599999999999996e-40   NR KAJ0412178.1 114742 g22631 i0 69.3 4.42342342342342 101 31 91 0 329 27 636 736 KAJ0412178.1 hypothetical protein ATCC90586_005791 [Pythium insidiosum] diamond 1473 153 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
28009606 28009606 PRJNA635397_P_NODE_43465_length_246_cov_0.901734_g43011_i0 PRJNA635397 43465 246 0.901734 2.21826564 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.02e-4   NR KAK1930244.1 4793 g43011 i0 33.7 7.51219512195122 86 52 98.8 2 2 244 775 860 KAK1930244.1 Methylthioribose transporter [Phytophthora citrophthora] diamond 1848 50.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
28028612 28028612 PRJNA635397_P_NODE_30825_length_286_cov_1.633803_g30371_i0 PRJNA635397 30825 286 1.633803 4.67267658 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 42 0.0188   NR CCA22428.1 890382 g30371 i0 40.4 0.493006993006993 47 27 48.3 1 54 191 3 49 CCA22428.1 conserved hypothetical protein [Albugo laibachii Nc14] diamond 141 42 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
28167389 28167389 PRJNA635397_P_NODE_38485_length_254_cov_2.226519_g38031_i0 PRJNA635397 38485 254 2.226519 5.65535826 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 113 3.5700000000000005e-27   NR KAF0682961.1 120398 g38031 i0 71.1 5.85826771653543 83 23 98 1 3 251 235 316 KAF0682961.1 hypothetical protein As57867_024896 [Aphanomyces stellatus] diamond 1488 114 0.991228070175439 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
28249347 28249347 PRJNA635397_P_NODE_7306_length_676_cov_1.860697_g6868_i0 PRJNA635397 7306 676 1.860697 12.57831172 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 158 1.37e-45   NR OQS02436.1 74557 g6868 i0 61.4 0.585798816568047 132 48 58.6 2 554 159 13 141 OQS02436.1 glycine cleavage system H protein, mitochondrial precursor [Thraustotheca clavata] diamond 396 158 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28388263 28388263 PRJNA635397_P_NODE_27086_length_306_cov_2.085837_g26632_i0 PRJNA635397 27086 306 2.085837 6.38266122 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 158 2.89e-45   NR KAJ8524911.1 4785 g26632 i0 66.7 4 102 34 100 0 1 306 132 233 KAJ8524911.1 hypothetical protein ON010_g16205 [Phytophthora cinnamomi] diamond 1224 158 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
28609342 28609342 PRJNA635397_P_NODE_11947_length_494_cov_9.776722_g11494_i0 PRJNA635397 11947 494 9.776722 48.29700668 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 161 6.4e-43   NR XP_024573476.1 4781 g11494 i0 64.7 8.30161943319838 116 41 70.4 0 22 369 533 648 XP_024573476.1 dead deah box helicase [Plasmopara halstedii] diamond 4101 162 0.993827160493827 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
29051576 29051576 PRJNA635397_P_NODE_44108_length_245_cov_1.058140_g43654_i0 PRJNA635397 44108 245 1.05814 2.592443 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 132 7.21e-34   NR RHY25645.1 157072 g43654 i0 80.2 1.98367346938776 81 16 99.2 0 3 245 274 354 RHY25645.1 hypothetical protein DYB32_008180 [Aphanomyces invadans] diamond 486 132 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
29493414 29493414 PRJNA635397_P_NODE_28950_length_296_cov_1.026906_g28496_i0 PRJNA635397 28950 296 1.026906 3.03964176 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 132 2.13e-35   NR KAJ0403308.1 114742 g28496 i0 69.3 6.24324324324324 88 27 89.2 0 289 26 217 304 KAJ0403308.1 hypothetical protein P43SY_009342 [Pythium insidiosum] diamond 1848 133 0.992481203007519 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
29701555 29701555 PRJNA635397_P_NODE_40050_length_251_cov_0.876404_g39596_i0 PRJNA635397 40050 251 0.876404 2.19977404 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 125 1.6e-34   NR OQS02346.1 74557 g39596 i0 74.7 0.944223107569721 79 20 94.4 0 239 3 1 79 OQS02346.1 hypothetical protein THRCLA_05268, partial [Thraustotheca clavata] diamond 237 125 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
29733253 29733253 PRJNA635397_P_NODE_29990_length_290_cov_1.576037_g29536_i0 PRJNA635397 29990 290 1.576037 4.5705073 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 80.5 9.79e-17   NR KAF0711430.1 120398 g29536 i0 53.7 1.38620689655172 67 31 69.3 0 212 12 43 109 KAF0711430.1 hypothetical protein As57867_005266, partial [Aphanomyces stellatus] diamond 402 80.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
29796492 29796492 PRJNA635397_P_NODE_43111_length_246_cov_2.994220_g42657_i0 PRJNA635397 43111 246 2.99422 7.3657812 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 142 9.779999999999999e-39   NR TMW54960.1 41045 g42657 i0 80.2 2.96341463414634 81 16 98.8 0 244 2 26 106 TMW54960.1 hypothetical protein Poli38472_014731 [Pythium oligandrum] diamond 729 142 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29809051 29809051 PRJNA635397_P_NODE_20851_length_353_cov_0.882143_g20397_i0 PRJNA635397 20851 353 0.882143 3.11396479 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 154 1.02e-40   NR KUF64619.1 4792 g20397 i0 61.5 18.9008498583569 117 44 98.6 1 351 4 973 1089 KUF64619.1 Diatom spindle kinesin-1 [Phytophthora nicotianae] diamond 6672 154 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
29954605 29954605 PRJNA635397_P_NODE_34311_length_270_cov_2.137056_g33857_i0 PRJNA635397 34311 270 2.137056 5.7700512 Peronospora belbahrii 622444 SAR_Eukaryotes SAR_Eukaryotes 49.3 2.47e-4   NR CAH0522485.1 622444 g33857 i0 53.8 2.28888888888889 39 14 38.9 1 60 164 220 258 CAH0522485.1 unnamed protein product [Peronospora belbahrii] diamond 618 49.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
30915080 30915080 PRJNA635397_P_NODE_42074_length_248_cov_0.891429_g41620_i0 PRJNA635397 42074 248 0.891429 2.21074392 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 52.4 1.55e-5   NR TMW65128.1 41045 g41620 i0 44.7 4.92338709677419 85 42 99.2 2 3 248 202 284 TMW65128.1 hypothetical protein Poli38472_009295 [Pythium oligandrum] diamond 1221 52.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30934106 30934106 PRJNA635397_P_NODE_18254_length_381_cov_1.340909_g17800_i0 PRJNA635397 18254 381 1.340909 5.10886329 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 149 1.4199999999999999e-42   NR OQS07123.1 74557 g17800 i0 55.9 1 127 52 100 1 1 381 17 139 OQS07123.1 FMN-binding negative transcriptional regulator [Thraustotheca clavata] diamond 381 149 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30997289 30997289 PRJNA635397_P_NODE_9254_length_583_cov_2.584314_g8806_i0 PRJNA635397 9254 583 2.584314 15.06655062 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 278 6.499999999999998e-88   NR XP_008605156.1 1156394 g8806 i0 68 2.99485420240137 194 62 99.8 0 2 583 47 240 XP_008605156.1 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [Saprolegnia diclina VS20] diamond 1746 278 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
31123201 31123201 PRJNA635397_P_NODE_37015_length_260_cov_0.967914_g36561_i0 PRJNA635397 37015 260 0.967914 2.5165764 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 121 3.89e-30   NR KAJ0394191.1 114742 g36561 i0 68.6 1.96153846153846 86 27 99.2 0 3 260 10 95 KAJ0394191.1 hypothetical protein ATCC90586_005135 [Pythium insidiosum] diamond 510 121 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32736261 32736261 PRJNA635397_P_NODE_22800_length_336_cov_1.125475_g22346_i0 PRJNA635397 22800 336 1.125475 3.781596 Phytophthora pseudosyringae 221518 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0485   NR KAG7391877.1 221518 g22346 i0 35.5 0.830357142857143 93 55 83 2 45 323 70 157 KAG7391877.1 hypothetical protein PHYPSEUDO_003083 [Phytophthora pseudosyringae] diamond 279 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora pseudosyringae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;