RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA635397" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA635397 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6257340 6257340 PRJNA635397_P_NODE_23865_length_327_cov_2.685039_g23411_i0 PRJNA635397 23865 327 2.685039 8.78007753 Metazoa 33208 Mollusca Mollusca 135 3.909999999999999e-35   NR XP_011445708.2 29159 g23411 i0 66.7 9.14678899082569 96 30 86.2 1 284 3 16 111 XP_011445708.2 protein disulfide-isomerase [Magallana gigas] diamond 2991 136 0.992647058823529 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
10809869 10809869 PRJNA635397_P_NODE_24089_length_326_cov_1.090909_g23635_i0 PRJNA635397 24089 326 1.090909 3.55636334 Mercenaria mercenaria 6596 Mollusca Mollusca 62.8 8.03e-9   NR XP_045181693.2 6596 g23635 i0 54.2 0.837423312883436 48 22 44.2 0 326 183 320 367 XP_045181693.2 uncharacterized protein LOC123540587 isoform X43 [Mercenaria mercenaria] diamond 273 62.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
26637716 26637716 PRJNA635397_P_NODE_44181_length_245_cov_0.906977_g43727_i0 PRJNA635397 44181 245 0.906977 2.22209365 Octopus sinensis 2607531 Mollusca Mollusca 95.9 5.33e-23   NR XP_036357561.1 2607531 g43727 i0 70 0.857142857142857 70 20 84.5 1 35 241 65 134 XP_036357561.1 uncharacterized protein LOC118762690 [Octopus sinensis] diamond 210 95.9 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
26935212 26935212 PRJNA635397_P_NODE_36402_length_262_cov_1.576720_g35948_i0 PRJNA635397 36402 262 1.57672 4.1310064 Metazoa 33208 Mollusca Mollusca 56.2 3.81e-7   NR XP_048248900.1 6454 g35948 i0 42 4.78625954198473 69 39 77.9 1 2 205 8 76 XP_048248900.1 histone-lysine N-methyltransferase SETMAR-like [Haliotis rufescens] diamond 1254 56.6 0.992932862190813 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
28470661 28470661 PRJNA635397_P_NODE_34286_length_270_cov_2.649746_g33832_i0 PRJNA635397 34286 270 2.649746 7.1543142 Octopus vulgaris 6645 Mollusca Mollusca 45.8 0.00128   NR CAI9738083.1 6645 g33832 i0 60 0.444444444444444 40 13 44.4 1 65 184 8 44 CAI9738083.1 Hypothetical predicted protein [Octopus vulgaris] diamond 120 45.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus vulgaris
28691786 28691786 PRJNA635397_P_NODE_47947_length_229_cov_2.314103_g47493_i0 PRJNA635397 47947 229 2.314103 5.29929587 Haliotis rufescens 6454 Mollusca Mollusca 43.1 0.0233   NR XP_048258469.1 6454 g47493 i0 68.2 3.75982532751092 22 7 28.8 0 204 139 667 688 XP_048258469.1 prestalk protein-like isoform X2 [Haliotis rufescens] diamond 861 43.5 0.990804597701149 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
29512314 29512314 PRJNA635397_P_NODE_34030_length_271_cov_2.823232_g33576_i0 PRJNA635397 34030 271 2.823232 7.65095872 Littorina saxatilis 31220 Mollusca Mollusca 43.1 0.0273   NR KAK7107423.1 31220 g33576 i0 63.3 0.664206642066421 30 11 33.2 0 219 130 164 193 KAK7107423.1 hypothetical protein V1264_015357 [Littorina saxatilis] diamond 180 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
30175648 30175648 PRJNA635397_P_NODE_44672_length_244_cov_1.929825_g44218_i0 PRJNA635397 44672 244 1.929825 4.708773 Octopus sinensis 2607531 Mollusca Mollusca 68.2 3.4e-12   NR XP_029653509.1 2607531 g44218 i0 59.3 0.725409836065574 59 24 72.5 0 224 48 1 59 XP_029653509.1 uncharacterized protein LOC115226637 [Octopus sinensis] diamond 177 68.2 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
30219762 30219762 PRJNA635397_P_NODE_47212_length_237_cov_2.689024_g46758_i0 PRJNA635397 47212 237 2.689024 6.37298688 Metazoa 33208 Mollusca Mollusca 85.5 1.29e-17   NR XP_065936763.1 29159 g46758 i0 61.5 4.21518987341772 65 25 82.3 0 219 25 211 275 XP_065936763.1 nucleoredoxin isoform X2 [Magallana gigas] diamond 999 85.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
30365723 30365723 PRJNA635397_P_NODE_20732_length_354_cov_1.177936_g20278_i0 PRJNA635397 20732 354 1.177936 4.16989344 Elysia marginata 1093978 Mollusca Mollusca 97.4 2.54e-22   NR GFR70878.1 1093978 g20278 i0 64.7 0.576271186440678 68 24 57.6 0 353 150 150 217 GFR70878.1 PiggyBac transposase Uribo2 [Elysia marginata] diamond 204 97.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia marginata
31610554 31610554 PRJNA635397_P_NODE_32356_length_279_cov_1.339806_g31902_i0 PRJNA635397 32356 279 1.339806 3.73805874 Octopus 6643 Mollusca Mollusca 134 3.8199999999999997e-34   NR CAI9720287.1 6645 g31902 i0 66.3 1.97849462365591 92 31 98.9 0 277 2 518 609 CAI9720287.1 and LDL-receptor class A domain-containing 2-like [Octopus vulgaris] diamond 552 134 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus vulgaris
31819265 31819265 PRJNA635397_P_NODE_47537_length_233_cov_3.487500_g47083_i0 PRJNA635397 47537 233 3.4875 8.125875 Gigantopelta aegis 1735272 Mollusca Mollusca 77.8 5.1e-16   NR XP_041364231.1 1735272 g47083 i0 47.6 1.08154506437768 84 37 99.1 2 231 1 16 99 XP_041364231.1 histone-lysine N-methyltransferase SETMAR-like [Gigantopelta aegis] diamond 252 77.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
32388874 32388874 PRJNA635397_P_NODE_11499_length_507_cov_1.082949_g11046_i0 PRJNA635397 11499 507 1.082949 5.49055143 Haliotis rubra 36100 Mollusca Mollusca 53.1 1.39e-4   NR XP_046584638.1 36100 g11046 i0 61.8 1.2189349112426 34 13 20.1 0 504 403 1312 1345 XP_046584638.1 uncharacterized protein LOC124291626 [Haliotis rubra] diamond 618 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;