contig_metadata
18 rows where analysis = "diamond", bioproject = "PRJNA635397" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3156584 | 3156584 | PRJNA635397_P_NODE_26443_length_310_cov_1.675105_g25989_i0 | PRJNA635397 | 26443 | 310 | 1.675105 | 5.1928255 | Bacteria | 2 | Bacteria | Bacteria | 165 | 2.21e-50 | NR | MBM4098314.1 | 2026780 | g25989 | i0 | 85 | 10.6258064516129 | 100 | 15 | 96.8 | 0 | 2 | 301 | 23 | 122 | MBM4098314.1 phosphoglycerate kinase [Planctomycetota bacterium] | diamond | 3294 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 24105594 | 24105594 | PRJNA635397_P_NODE_19419_length_367_cov_1.363946_g18965_i0 | PRJNA635397 | 19419 | 367 | 1.363946 | 5.00568182 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 65.9 | 2.07e-11 | NR | RYD71399.1 | 2026800 | g18965 | i0 | 50.7 | 0.596730245231608 | 73 | 36 | 59.7 | 0 | 262 | 44 | 6 | 78 | RYD71399.1 MAG: hypothetical protein EOP84_24950, partial [Verrucomicrobiaceae bacterium] | diamond | 219 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 26891355 | 26891355 | PRJNA635397_P_NODE_40941_length_250_cov_0.870056_g40487_i0 | PRJNA635397 | 40941 | 250 | 0.870056 | 2.17514 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 62.4 | 4.89e-9 | NR | MEI6343602.1 | 2026799 | g40487 | i0 | 47.5 | 0.732 | 61 | 26 | 70.8 | 2 | 249 | 73 | 202 | 258 | MEI6343602.1 glycosyltransferase [Verrucomicrobiota bacterium] | diamond | 183 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27049435 | 27049435 | PRJNA635397_P_NODE_42182_length_248_cov_0.885714_g41728_i0 | PRJNA635397 | 42182 | 248 | 0.885714 | 2.19657072 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 156 | 4.53e-44 | NR | MCE9566415.1 | 2026780 | g41728 | i0 | 86.4 | 3.94354838709677 | 81 | 11 | 98 | 0 | 3 | 245 | 311 | 391 | MCE9566415.1 phage portal protein [Planctomycetota bacterium] | diamond | 978 | 156 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27491805 | 27491805 | PRJNA635397_P_NODE_41363_length_249_cov_0.886364_g40909_i0 | PRJNA635397 | 41363 | 249 | 0.886364 | 2.20704636 | Crateriforma spongiae | 2724528 | Bacteria | Bacteria | 42.4 | 0.0473 | NR | WP_168564633.1 | 2724528 | g40909 | i0 | 41.2 | 0.614457831325301 | 51 | 29 | 60.2 | 1 | 156 | 7 | 46 | 96 | WP_168564633.1 adenylyl-sulfate kinase [Crateriforma spongiae] | diamond | 153 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Crateriforma | Crateriforma spongiae | |
| 27965262 | 27965262 | PRJNA635397_P_NODE_36205_length_263_cov_1.368421_g35751_i0 | PRJNA635397 | 36205 | 263 | 1.368421 | 3.59894723 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 112 | 1.15e-26 | NR | MDZ4742534.1 | 2026799 | g35751 | i0 | 64.6 | 1.87072243346008 | 82 | 29 | 93.5 | 0 | 262 | 17 | 94 | 175 | MDZ4742534.1 thiamine pyrophosphate-binding protein [Verrucomicrobiota bacterium] | diamond | 492 | 112 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28565250 | 28565250 | PRJNA635397_P_NODE_32927_length_276_cov_2.024631_g32473_i0 | PRJNA635397 | 32927 | 276 | 2.024631 | 5.58798156 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 152 | 2.2499999999999993e-43 | NR | RYD69104.1 | 2026800 | g32473 | i0 | 84.6 | 0.989130434782609 | 91 | 14 | 98.9 | 0 | 274 | 2 | 138 | 228 | RYD69104.1 MAG: MFS transporter, partial [Verrucomicrobiaceae bacterium] | diamond | 273 | 152 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 28924930 | 28924930 | PRJNA635397_P_NODE_21548_length_346_cov_1.864469_g21094_i0 | PRJNA635397 | 21548 | 346 | 1.864469 | 6.45106274 | Bacteria | 2 | Bacteria | Bacteria | 46.6 | 0.00549 | NR | MBX3402345.1 | 2026777 | g21094 | i0 | 31.8 | 4.70809248554913 | 110 | 72 | 94.5 | 2 | 334 | 8 | 786 | 893 | MBX3402345.1 alanine--tRNA ligase [Phycisphaeraceae bacterium] | diamond | 1629 | 47 | 0.991489361702128 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 29809052 | 29809052 | PRJNA635397_P_NODE_41911_length_248_cov_1.394286_g41457_i0 | PRJNA635397 | 41911 | 248 | 1.394286 | 3.45782928 | Bacteria | 2 | Bacteria | Bacteria | 70.9 | 6.27e-13 | NR | WP_105336449.1 | 124 | g41457 | i0 | 54.7 | 1.24596774193548 | 53 | 24 | 64.1 | 0 | 2 | 160 | 132 | 184 | WP_105336449.1 hypothetical protein [Blastopirellula marina] | diamond | 309 | 70.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Blastopirellula | Blastopirellula marina | |
| 29923090 | 29923090 | PRJNA635397_P_NODE_46091_length_242_cov_2.899408_g45637_i0 | PRJNA635397 | 46091 | 242 | 2.899408 | 7.01656736 | Stieleria neptunia | 2527979 | Bacteria | Bacteria | 41.6 | 0.0284 | NR | WP_145386459.1 | 2527979 | g45637 | i0 | 40 | 0.557851239669422 | 45 | 27 | 55.8 | 0 | 226 | 92 | 35 | 79 | WP_145386459.1 hypothetical protein [Stieleria neptunia] | diamond | 135 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Stieleria | Stieleria neptunia | |
| 29998826 | 29998826 | PRJNA635397_P_NODE_39091_length_253_cov_0.866667_g38637_i0 | PRJNA635397 | 39091 | 253 | 0.866667 | 2.19266751 | Bacteria | 2 | Bacteria | Bacteria | 123 | 2.3e-31 | NR | PYJ03686.1 | 2026799 | g38637 | i0 | 73.5 | 3.88932806324111 | 83 | 22 | 98.4 | 0 | 3 | 251 | 141 | 223 | PYJ03686.1 MAG: hypothetical protein DME25_11515 [Verrucomicrobiota bacterium] | diamond | 984 | 124 | 0.991935483870968 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30365735 | 30365735 | PRJNA635397_P_NODE_8832_length_601_cov_1.886364_g8385_i0 | PRJNA635397 | 8832 | 601 | 1.886364 | 11.33704764 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 205 | 1.07e-61 | NR | RYD65414.1 | 2026800 | g8385 | i0 | 78.7 | 0.608985024958403 | 122 | 26 | 60.9 | 0 | 2 | 367 | 199 | 320 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 366 | 205 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30681026 | 30681026 | PRJNA635397_P_NODE_35313_length_266_cov_2.253886_g34859_i0 | PRJNA635397 | 35313 | 266 | 2.253886 | 5.99533676 | Limisphaera sp. | 2838792 | Bacteria | Bacteria | 43.5 | 0.0253 | NR | MEJ5238961.1 | 2838792 | g34859 | i0 | 32.5 | 0.93609022556391 | 83 | 55 | 93.6 | 1 | 14 | 262 | 135 | 216 | MEJ5238961.1 FIST N-terminal domain-containing protein [Limisphaera sp.] | diamond | 249 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaeraceae | Limisphaera | Limisphaera sp. | |
| 31123196 | 31123196 | PRJNA635397_P_NODE_29155_length_294_cov_3.800905_g28701_i0 | PRJNA635397 | 29155 | 294 | 3.800905 | 11.1746607 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 43.5 | 0.0369 | NR | MCL4203912.1 | 2699754 | g28701 | i0 | 28.6 | 0.857142857142857 | 84 | 59 | 85.7 | 1 | 286 | 35 | 285 | 367 | MCL4203912.1 DEAD/DEAH box helicase [Pirellulaceae bacterium] | diamond | 252 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 31534880 | 31534880 | PRJNA635397_P_NODE_35816_length_264_cov_2.136126_g35362_i0 | PRJNA635397 | 35816 | 264 | 2.136126 | 5.63937264 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 41.2 | 0.0315 | NR | HSZ57079.1 | 2876886 | g35362 | i0 | 35.8 | 0.602272727272727 | 53 | 32 | 60.2 | 1 | 48 | 206 | 30 | 80 | HSZ57079.1 hypothetical protein [Tepidisphaeraceae bacterium] | diamond | 159 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 32009218 | 32009218 | PRJNA635397_P_NODE_21558_length_346_cov_1.710623_g21104_i0 | PRJNA635397 | 21558 | 346 | 1.710623 | 5.91875558 | Singulisphaera acidiphila | 466153 | Bacteria | Bacteria | 44.3 | 0.035 | NR | WP_015245602.1 | 466153 | g21104 | i0 | 38.8 | 0.69364161849711 | 80 | 46 | 68.5 | 2 | 77 | 313 | 181 | 258 | WP_015245602.1 serine/threonine-protein kinase [Singulisphaera acidiphila] | diamond | 240 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 32230884 | 32230884 | PRJNA635397_P_NODE_24378_length_324_cov_1.215139_g23924_i0 | PRJNA635397 | 24378 | 324 | 1.215139 | 3.93705036 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 88.2 | 1.18e-18 | NR | MBY0308879.1 | 2052180 | g23924 | i0 | 92.9 | 0.388888888888889 | 42 | 3 | 38.9 | 0 | 130 | 5 | 191 | 232 | MBY0308879.1 hypothetical protein [Phycisphaerales bacterium] | diamond | 126 | 88.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32610165 | 32610165 | PRJNA635397_P_NODE_24220_length_325_cov_1.198413_g23766_i0 | PRJNA635397 | 24220 | 325 | 1.198413 | 3.89484225 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 44.7 | 0.0162 | NR | TAH36757.1 | 2026780 | g23766 | i0 | 36.4 | 0.710769230769231 | 77 | 40 | 67.4 | 3 | 319 | 101 | 64 | 135 | TAH36757.1 MAG: ribonuclease PH [Planctomycetota bacterium] | diamond | 231 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;