RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA631796" and tax_phylum = "Pisuviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA631796 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28249287 28249287 PRJNA631796_P_NODE_11226_length_208_cov_1.619048_g10948_i0 PRJNA631796 11226 208 1.619048 3.36761984 Lysoka partiti-like virus 2169481 Viruses Viruses 70.1 4.12e-12   NR AWV67025.1 2169481 g10948 i0 48.5 0.980769230769231 68 35 98.1 0 205 2 17 84 AWV67025.1 RdRp, partial [Lysoka partiti-like virus] diamond 204 70.1 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Lysoka partiti-like virus
31850851 31850851 PRJNA631796_P_NODE_12357_length_204_cov_0.895105_g12079_i0 PRJNA631796 12357 204 0.895105 1.8260142 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 122 2.76e-30   NR DBA56413.1 3032225 g12079 i0 97 0.985294117647059 67 2 98.5 0 2 202 646 712 DBA56413.1 TPA_asm: hypothetical protein, partial [Periplaneta americana dicistro-like virus] diamond 201 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;