RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA631796" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631796 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29923050 29923050 PRJNA631796_P_NODE_12711_length_202_cov_3.560284_g12433_i0 PRJNA631796 12711 202 3.560284 7.19177368 Elysia chlorotica 188477 Mollusca Mollusca 55.5 7.23e-7   NR RUS68674.1 188477 g12433 i0 37.5 3.6831683168316798 64 40 95 0 4 195 333 396 RUS68674.1 hypothetical protein EGW08_023562 [Elysia chlorotica] diamond 744 55.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
31850853 31850853 PRJNA631796_P_NODE_6217_length_275_cov_2.294393_g5939_i0 PRJNA631796 6217 275 2.294393 6.30958075 Mytilus edulis 6550 Mollusca Mollusca 56.6 5.94e-7   NR CAG2187267.1 6550 g5939 i0 42.9 0.687272727272727 63 35 67.6 1 238 53 192 254 CAG2187267.1 unnamed protein product [Mytilus edulis] diamond 189 56.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
32388846 32388846 PRJNA631796_P_NODE_8479_length_234_cov_1.479769_g8201_i0 PRJNA631796 8479 234 1.479769 3.46265946 Haliotis asinina 109174 Mollusca Mollusca 43.9 0.0128   NR XP_067657806.1 109174 g8201 i0 35.4 1.64102564102564 65 36 82.1 2 234 43 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
32610134 32610134 PRJNA631796_P_NODE_7060_length_256_cov_6.051282_g6782_i0 PRJNA631796 7060 256 6.051282 15.49128192 Potamilus streckersoni 2493646 Mollusca Mollusca 43.5 0.00546   NR KAK3580123.1 2493646 g6782 i0 45.5 0.99609375 44 24 51.6 0 39 170 4 47 KAK3580123.1 hypothetical protein CHS0354_034063 [Potamilus streckersoni] diamond 255 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;