RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA631796" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA631796 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3154240 3154240 PRJNA631796_P_NODE_12503_length_203_cov_1.422535_g12225_i0 PRJNA631796 12503 203 1.422535 2.88774605 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 57.8 3.48e-9   NR XP_044561474.1 5763 g12225 i0 82.9 0.605911330049261 41 7 60.6 0 2 124 28 68 XP_044561474.1 uncharacterized protein FDP41_004056 [Naegleria fowleri] diamond 123 57.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
21005779 21005779 PRJNA631796_P_NODE_13817_length_191_cov_2.553846_g13539_i0 PRJNA631796 13817 191 2.553846 4.87784586 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 89.4 4.95e-19   NR XP_002672654.1 5762 g13539 i0 81 0.989528795811518 63 10 99 2 190 2 1 61 XP_002672654.1 uncharacterized protein NAEGRDRAFT_81162 [Naegleria gruberi] diamond 189 89.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28975790 28975790 PRJNA631796_P_NODE_9808_length_220_cov_1.006289_g9530_i0 PRJNA631796 9808 220 1.006289 2.2138358 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 55.8 6.83e-7   NR CAG4715470.1 5763 g9530 i0 49.2 0.831818181818182 61 27 83.2 1 186 4 13 69 CAG4715470.1 unnamed protein product, partial [Naegleria fowleri] diamond 183 55.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30365680 30365680 PRJNA631796_P_NODE_8752_length_231_cov_1.347059_g8474_i0 PRJNA631796 8752 231 1.347059 3.11170629 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 89.7 9.12e-19   NR XP_044557499.1 5763 g8474 i0 55.4 0.961038961038961 74 33 96.1 0 3 224 120 193 XP_044557499.1 uncharacterized protein FDP41_009034 [Naegleria fowleri] diamond 222 89.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30554680 30554680 PRJNA631796_P_NODE_9053_length_228_cov_0.868263_g8775_i0 PRJNA631796 9053 228 0.868263 1.97963964 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 140 9.28e-37   NR XP_002675492.1 5762 g8775 i0 84.2 1 76 12 100 0 1 228 523 598 XP_002675492.1 uncharacterized protein NAEGRDRAFT_69161 [Naegleria gruberi] diamond 228 140 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31186475 31186475 PRJNA631796_P_NODE_7855_length_242_cov_1.348066_g7577_i0 PRJNA631796 7855 242 1.348066 3.26231972 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 125 1.18e-35   NR XP_044569047.1 5763 g7577 i0 86.3 0.991735537190083 80 11 99.2 0 242 3 6 85 XP_044569047.1 uncharacterized protein FDP41_007511 [Naegleria fowleri] diamond 240 125 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31281532 31281532 PRJNA631796_P_NODE_12635_length_203_cov_0.901408_g12357_i0 PRJNA631796 12635 203 0.901408 1.82985824 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 130 2.42e-33   NR XP_002681494.1 5762 g12357 i0 98.5 0.990147783251232 67 1 99 0 202 2 190 256 XP_002681494.1 uncharacterized protein NAEGRDRAFT_46369 [Naegleria gruberi] diamond 201 130 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32736232 32736232 PRJNA631796_P_NODE_12820_length_202_cov_0.985816_g12542_i0 PRJNA631796 12820 202 0.985816 1.99134832 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 131 1.4e-35   NR XP_044560391.1 5763 g12542 i0 85.1 1.99009900990099 67 10 99.5 0 2 202 236 302 XP_044560391.1 uncharacterized protein FDP41_005005 [Naegleria fowleri] diamond 402 131 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;