RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA631796" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA631796 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28533819 28533819 PRJNA631796_P_NODE_8427_length_235_cov_0.936782_g8149_i0 PRJNA631796 8427 235 0.936782 2.2014377 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00366   NR XP_012652362.1 312017 g8149 i0 48.9 1.14893617021277 45 23 57.4 0 26 160 24 68 XP_012652362.1 hypothetical protein TTHERM_000294739 [Tetrahymena thermophila SB210] diamond 270 43.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30902441 30902441 PRJNA631796_P_NODE_12194_length_204_cov_3.041958_g11916_i0 PRJNA631796 12194 204 3.041958 6.20559432 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 64.7 3.96e-10   NR KRX05960.1 266149 g11916 i0 60.8 0.75 51 20 75 0 178 26 408 458 KRX05960.1 hypothetical protein PPERSA_01038 [Pseudocohnilembus persalinus] diamond 153 64.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;