contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA631796" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27017596 | 27017596 | PRJNA631796_P_NODE_11962_length_205_cov_1.513889_g11684_i0 | PRJNA631796 | 11962 | 205 | 1.513889 | 3.10347245 | Staurois parvus | 386267 | Chordata | Chordata | 72.4 | 1.43e-14 | NR | CAI9547784.1 | 386267 | g11684 | i0 | 46.3 | 0.980487804878049 | 67 | 36 | 98 | 0 | 202 | 2 | 9 | 75 | CAI9547784.1 unnamed protein product, partial [Staurois parvus] | diamond | 201 | 72.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Ranidae | Staurois | Staurois parvus | |
| 28691742 | 28691742 | PRJNA631796_S_NODE_72467_length_215_cov_2.077922_g72300_i0 | PRJNA631796 | 72467 | 215 | 2.077922 | 4.4675323 | Erpetoichthys calabaricus | 27687 | Chordata | Chordata | 99.4 | 5.98e-23 | NR | XP_051791274.1 | 27687 | g72300 | i0 | 80.3 | 9.16744186046512 | 66 | 12 | 90.7 | 1 | 200 | 6 | 115 | 180 | XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] | diamond | 1971 | 99.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Erpetoichthys | Erpetoichthys calabaricus | |
| 29259628 | 29259628 | PRJNA631796_S_NODE_38989_length_241_cov_1.777778_g38822_i0 | PRJNA631796 | 38989 | 241 | 1.777778 | 4.28444498 | Hypanus sabinus | 79690 | Chordata | Chordata | 43.5 | 0.0197 | NR | XP_059823631.1 | 79690 | g38822 | i0 | 41 | 0.485477178423237 | 39 | 23 | 48.5 | 0 | 125 | 241 | 558 | 596 | XP_059823631.1 IQ calmodulin-binding motif-containing protein 1 isoform X1 [Hypanus sabinus] | diamond | 117 | 43.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Myliobatiformes | Dasyatidae | Hypanus | Hypanus sabinus | |
| 30365679 | 30365679 | PRJNA631796_P_NODE_7092_length_256_cov_1.138462_g6814_i0 | PRJNA631796 | 7092 | 256 | 1.138462 | 2.91446272 | Erpetoichthys calabaricus | 27687 | Chordata | Chordata | 107 | 8.76e-26 | NR | XP_051791274.1 | 27687 | g6814 | i0 | 77 | 7.8984375 | 74 | 16 | 85.5 | 1 | 254 | 36 | 131 | 204 | XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] | diamond | 2022 | 107 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Erpetoichthys | Erpetoichthys calabaricus | |
| 30617920 | 30617920 | PRJNA631796_S_NODE_18113_length_271_cov_0.914286_g17946_i0 | PRJNA631796 | 18113 | 271 | 0.914286 | 2.47771506 | Myotis myotis | 51298 | Chordata | Chordata | 43.5 | 0.0121 | NR | KAF6336815.1 | 51298 | g17946 | i0 | 66.7 | 0.298892988929889 | 27 | 9 | 29.9 | 0 | 160 | 80 | 73 | 99 | KAF6336815.1 hypothetical protein mMyoMyo1_012035 [Myotis myotis] | diamond | 81 | 43.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Chiroptera | Vespertilionidae | Myotis | Myotis myotis | |
| 32230853 | 32230853 | PRJNA631796_S_NODE_120438_length_203_cov_0.901408_g120271_i0 | PRJNA631796 | 120438 | 203 | 0.901408 | 1.82985824 | Equus przewalskii | 9798 | Chordata | Chordata | 44.7 | 0.00472 | NR | XP_070484240.1 | 9798 | g120271 | i0 | 52.3 | 2.7192118226601 | 44 | 21 | 65 | 0 | 162 | 31 | 2 | 45 | XP_070484240.1 LOW QUALITY PROTEIN: LINE-1 retrotransposable element ORF2 protein [Equus przewalskii] | diamond | 552 | 44.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Perissodactyla | Equidae | Equus | Equus przewalskii | |
| 32830562 | 32830562 | PRJNA631796_S_NODE_49800_length_231_cov_2.011765_g49633_i0 | PRJNA631796 | 49800 | 231 | 2.011765 | 4.64717715 | Staurois parvus | 386267 | Chordata | Chordata | 59.7 | 7.14e-10 | NR | CAI9620946.1 | 386267 | g49633 | i0 | 70.3 | 0.480519480519481 | 37 | 11 | 48.1 | 0 | 52 | 162 | 23 | 59 | CAI9620946.1 unnamed protein product [Staurois parvus] | diamond | 111 | 59.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Ranidae | Staurois | Staurois parvus | |
| 32893347 | 32893347 | PRJNA631796_S_NODE_82700_length_209_cov_2.709459_g82533_i0 | PRJNA631796 | 82700 | 209 | 2.709459 | 5.66276931 | Staurois parvus | 386267 | Chordata | Chordata | 41.6 | 0.0119 | NR | CAI9566680.1 | 386267 | g82533 | i0 | 58.5 | 0.588516746411483 | 41 | 15 | 56 | 2 | 196 | 80 | 25 | 65 | CAI9566680.1 unnamed protein product, partial [Staurois parvus] | diamond | 123 | 41.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Ranidae | Staurois | Staurois parvus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;