contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA631796" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6255670 | 6255670 | PRJNA631796_P_NODE_11685_length_206_cov_1.765517_g11407_i0 | PRJNA631796 | 11685 | 206 | 1.765517 | 3.63696502 | FCB group | 1783270 | Bacteria | Bacteria | 136 | 3.83e-40 | NR | MFM9500543.1 | 33899 | g11407 | i0 | 100 | 1.98058252427184 | 68 | 0 | 99 | 0 | 1 | 204 | 6 | 73 | MFM9500543.1 magnesium-translocating P-type ATPase [Streptomyces galilaeus] | diamond | 408 | 136 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces galilaeus | ||
| 27662271 | 27662271 | PRJNA631796_P_NODE_12344_length_204_cov_0.895105_g12066_i0 | PRJNA631796 | 12344 | 204 | 0.895105 | 1.8260142 | Rothia | 32207 | Bacteria | Bacteria | 140 | 1.01e-40 | NR | WP_151146219.1 | 169480 | g12066 | i0 | 100 | 2 | 68 | 0 | 100 | 0 | 204 | 1 | 54 | 121 | WP_151146219.1 tetratricopeptide repeat protein [Rothia amarae] | diamond | 408 | 140 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia amarae | ||
| 27838843 | 27838843 | PRJNA631796_S_NODE_133444_length_194_cov_2.421053_g133277_i0 | PRJNA631796 | 133444 | 194 | 2.421053 | 4.69684282 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 50.4 | 5.36e-6 | NR | MCQ8208689.1 | 1734925 | g133277 | i0 | 100 | 0.34020618556701 | 22 | 0 | 34 | 0 | 3 | 68 | 1 | 22 | MCQ8208689.1 hypothetical protein [Cutibacterium acnes subsp. acnes] | diamond | 66 | 50.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 28565208 | 28565208 | PRJNA631796_P_NODE_12287_length_204_cov_0.895105_g12009_i0 | PRJNA631796 | 12287 | 204 | 0.895105 | 1.8260142 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 123 | 1.08e-30 | NR | WP_306558879.1 | 1528099 | g12009 | i0 | 100 | 0.985294117647059 | 67 | 0 | 98.5 | 0 | 203 | 3 | 42 | 108 | WP_306558879.1 HAD-IC family P-type ATPase [Lawsonella clevelandensis] | diamond | 201 | 123 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 29493411 | 29493411 | PRJNA631796_P_NODE_5030_length_308_cov_2.372470_g4752_i0 | PRJNA631796 | 5030 | 308 | 2.37247 | 7.3072076 | FCB group | 1783270 | Bacteria | Bacteria | 124 | 1.5e-31 | NR | WP_091275453.1 | 686309 | g4752 | i0 | 65 | 17.6493506493506 | 100 | 35 | 97.4 | 0 | 306 | 7 | 277 | 376 | WP_091275453.1 S8 family peptidase [Micromonospora haikouensis] | diamond | 5436 | 125 | 0.992 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Micromonospora haikouensis | ||
| 29543872 | 29543872 | PRJNA631796_P_NODE_5770_length_287_cov_1.119469_g5492_i0 | PRJNA631796 | 5770 | 287 | 1.119469 | 3.21287603 | Pseudonocardiaceae bacterium | 1873463 | Bacteria | Bacteria | 43.1 | 0.0431 | NR | HEY1572059.1 | 1873463 | g5492 | i0 | 30.2 | 0.898954703832753 | 86 | 56 | 87.8 | 2 | 271 | 20 | 212 | 295 | HEY1572059.1 SpoIIE family protein phosphatase [Pseudonocardiaceae bacterium] | diamond | 258 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Pseudonocardiaceae bacterium | |||
| 29809048 | 29809048 | PRJNA631796_P_NODE_12131_length_205_cov_0.888889_g11853_i0 | PRJNA631796 | 12131 | 205 | 0.888889 | 1.82222245 | Bacteria | 2 | Bacteria | Bacteria | 90.5 | 9.84e-21 | NR | HYY79178.1 | 1883427 | g11853 | i0 | 58.2 | 5.86829268292683 | 67 | 28 | 98 | 0 | 203 | 3 | 67 | 133 | HYY79178.1 type 1 glutamine amidotransferase domain-containing protein [Actinomycetes bacterium] | diamond | 1203 | 90.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetes bacterium | |||||
| 30965773 | 30965773 | PRJNA631796_P_NODE_11214_length_208_cov_1.741497_g10936_i0 | PRJNA631796 | 11214 | 208 | 1.741497 | 3.62231376 | Glycomyces arizonensis | 256035 | Bacteria | Bacteria | 81.3 | 6.18e-16 | NR | WP_051393720.1 | 256035 | g10936 | i0 | 63.2 | 6.90865384615385 | 68 | 22 | 98.1 | 1 | 208 | 5 | 210 | 274 | WP_051393720.1 S8 family serine peptidase [Glycomyces arizonensis] | diamond | 1437 | 81.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Glycomycetales | Glycomycetaceae | Glycomyces | Glycomyces arizonensis | ||
| 32040823 | 32040823 | PRJNA631796_P_NODE_12898_length_202_cov_0.907801_g12620_i0 | PRJNA631796 | 12898 | 202 | 0.907801 | 1.83375802 | Dermacoccus nishinomiyaensis | 1274 | Bacteria | Bacteria | 87.8 | 2.3e-18 | NR | WP_170957296.1 | 1274 | g12620 | i0 | 100 | 0.698019801980198 | 47 | 0 | 69.8 | 0 | 141 | 1 | 1 | 47 | WP_170957296.1 hypothetical protein [Dermacoccus nishinomiyaensis] | diamond | 141 | 87.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermacoccaceae | Dermacoccus | Dermacoccus nishinomiyaensis | ||
| 32211628 | 32211628 | PRJNA631796_P_NODE_6338_length_272_cov_2.123223_g6060_i0 | PRJNA631796 | 6338 | 272 | 2.123223 | 5.77516656 | Actinomycetes | 1760 | Bacteria | Bacteria | 119 | 3.34e-29 | NR | WP_091678716.1 | 490629 | g6060 | i0 | 71.1 | 13.8970588235294 | 90 | 26 | 99.3 | 0 | 1 | 270 | 288 | 377 | WP_091678716.1 S8 family serine peptidase [Amycolatopsis marina] | diamond | 3780 | 119 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis marina | ||
| 32547269 | 32547269 | PRJNA631796_P_NODE_9139_length_227_cov_1.156627_g8861_i0 | PRJNA631796 | 9139 | 227 | 1.156627 | 2.62554329 | Aeromicrobium stalagmiti | 2738988 | Bacteria | Bacteria | 139 | 9.03e-39 | NR | WP_173492924.1 | 2738988 | g8861 | i0 | 100 | 0.991189427312775 | 75 | 0 | 99.1 | 0 | 3 | 227 | 121 | 195 | WP_173492924.1 hypothetical protein, partial [Aeromicrobium stalagmiti] | diamond | 225 | 139 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Aeromicrobium | Aeromicrobium stalagmiti |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;