RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA631796" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA631796 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4431074 4431074 PRJNA631796_P_NODE_11524_length_207_cov_0.876712_g11246_i0 PRJNA631796 11524 207 0.876712 1.81479384 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 113 1.12e-29   NR KAJ1440792.1 483371 g11246 i0 81.2 1 69 13 100 0 207 1 85 153 KAJ1440792.1 ribosomal protein L22/L17 [Ochromonadaceae sp. CCMP2298] diamond 207 113 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
12082804 12082804 PRJNA631796_P_NODE_12350_length_204_cov_0.895105_g12072_i0 PRJNA631796 12350 204 0.895105 1.8260142 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 110 3.26e-26   NR CEM28386.1 1169540 g12072 i0 79.4 1 68 14 100 0 204 1 435 502 CEM28386.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 204 110 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
27251489 27251489 PRJNA631796_P_NODE_12003_length_205_cov_0.944444_g11725_i0 PRJNA631796 12003 205 0.944444 1.9361102 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 100 6.72e-23   NR CAI5722356.1 86335 g11725 i0 57.6 5.38536585365854 92 11 93.7 1 12 203 265 356 CAI5722356.1 unnamed protein product [Peronospora destructor] diamond 1104 101 0.99009900990099 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora destructor
27333952 27333952 PRJNA631796_P_NODE_11783_length_206_cov_0.882759_g11505_i0 PRJNA631796 11783 206 0.882759 1.81848354 Pelagomonas calceolata 35677 SAR_Eukaryotes SAR_Eukaryotes 122 5.04e-32   NR CAH0369848.1 35677 g11505 i0 80.9 0.990291262135922 68 13 99 0 1 204 190 257 CAH0369848.1 unnamed protein product [Pelagomonas calceolata] diamond 204 122 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Pelagomonas Pelagomonas calceolata
28533819 28533819 PRJNA631796_P_NODE_8427_length_235_cov_0.936782_g8149_i0 PRJNA631796 8427 235 0.936782 2.2014377 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00366   NR XP_012652362.1 312017 g8149 i0 48.9 1.14893617021277 45 23 57.4 0 26 160 24 68 XP_012652362.1 hypothetical protein TTHERM_000294739 [Tetrahymena thermophila SB210] diamond 270 43.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30902441 30902441 PRJNA631796_P_NODE_12194_length_204_cov_3.041958_g11916_i0 PRJNA631796 12194 204 3.041958 6.20559432 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 64.7 3.96e-10   NR KRX05960.1 266149 g11916 i0 60.8 0.75 51 20 75 0 178 26 408 458 KRX05960.1 hypothetical protein PPERSA_01038 [Pseudocohnilembus persalinus] diamond 153 64.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32357472 32357472 PRJNA631796_S_NODE_24479_length_259_cov_1.292929_g24312_i0 PRJNA631796 24479 259 1.292929 3.34868611 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 75.5 8.68e-16   NR YP_008475337.1 1202772 g24312 i0 75.5 0.567567567567568 49 12 56.8 0 113 259 1 49 YP_008475337.1 ATP synthase F0 subunit 9 [Achlya hypogyna] diamond 147 75.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
32420549 32420549 PRJNA631796_P_NODE_13179_length_201_cov_0.914286_g12901_i0 PRJNA631796 13179 201 0.914286 1.83771486 Symbiodinium microadriaticum 2951 SAR_Eukaryotes SAR_Eukaryotes 132 1.06e-35   NR CAE7564791.1 2951 g12901 i0 82.1 2 67 12 100 0 201 1 197 263 CAE7564791.1 unnamed protein product [Symbiodinium microadriaticum] diamond 402 132 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium microadriaticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;