contig_metadata
2 rows where analysis = "diamond", bioproject = "PRJNA631119" and tax_phylum = "candidate division CSSED10-310"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30807613 | 30807613 | PRJNA631119_P_NODE_26634_length_266_cov_1.953368_g26516_i0 | PRJNA631119 | 26634 | 266 | 1.953368 | 5.19595888 | candidate division CSSED10-310 bacterium | 2855610 | Bacteria | Bacteria | 60.8 | 2.08e-8 | NR | MBN1880369.1 | 2855610 | g26516 | i0 | 42.2 | 2.09774436090226 | 64 | 37 | 72.2 | 0 | 65 | 256 | 247 | 310 | MBN1880369.1 S8 family serine peptidase [candidate division CSSED10-310 bacterium] | diamond | 558 | 60.8 | 1 | Bacteria | Bacteria candidate phyla | candidate division CSSED10-310 | candidate division CSSED10-310 bacterium | ||||||
| 32736220 | 32736220 | PRJNA631119_P_NODE_39260_length_241_cov_0.916667_g39142_i0 | PRJNA631119 | 39260 | 241 | 0.916667 | 2.20916747 | candidate division CSSED10-310 bacterium | 2855610 | Bacteria | Bacteria | 42.4 | 0.0484 | NR | MBN1550320.1 | 2855610 | g39142 | i0 | 36.4 | 0.547717842323652 | 44 | 28 | 54.8 | 0 | 54 | 185 | 237 | 280 | MBN1550320.1 efflux RND transporter periplasmic adaptor subunit [candidate division CSSED10-310 bacterium] | diamond | 132 | 42.4 | 1 | Bacteria | Bacteria candidate phyla | candidate division CSSED10-310 | candidate division CSSED10-310 bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;