RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA631119" and tax_phylum = "Candidatus Zixiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631119 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26605877 26605877 PRJNA631119_P_NODE_39461_length_241_cov_0.916667_g39343_i0 PRJNA631119 39461 241 0.916667 2.20916747 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 61.6 7.64e-9   NR MBI5266788.1 2053527 g39343 i0 47.6 1.9792531120332 82 32 97.1 2 239 6 252 326 MBI5266788.1 DNRLRE domain-containing protein [Candidatus Zixiibacteriota bacterium] diamond 477 61.6 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
30346733 30346733 PRJNA631119_P_NODE_9412_length_392_cov_1.454545_g9294_i0 PRJNA631119 9412 392 1.454545 5.7018164 Bacteria 2 Bacteria Bacteria 53.9 2.33e-5   NR UCC79135.1 2053527 g9294 i0 45.2 1.66836734693878 73 36 55.1 2 176 391 227 296 UCC79135.1 MAG: T9SS type A sorting domain-containing protein, partial [Candidatus Zixiibacteriota bacterium] diamond 654 54.3 0.992633517495396 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;