RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA631119" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA631119 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27997006 27997006 PRJNA631119_P_NODE_9905_length_384_cov_2.437299_g9787_i0 PRJNA631119 9905 384 2.437299 9.35922816 Atrato Partiti-like virus 6 2689331 Viruses Viruses 78.6 4.99e-14   NR QHA33706.1 2689331 g9787 i0 28 0.9765625 125 88 96.1 1 374 6 143 267 QHA33706.1 reverse transcriptase [Atrato Partiti-like virus 6] diamond 375 78.6 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Atrato Partiti-like virus 6
32736219 32736219 PRJNA631119_P_NODE_36180_length_244_cov_2.959064_g36062_i0 PRJNA631119 36180 244 2.959064 7.22011616 Partitiviridae sp. 1955170 Viruses Viruses 48.1 4.71e-4   NR QYV43083.1 1955170 g36062 i0 37.3 0.725409836065574 59 37 72.5 0 65 241 435 493 QYV43083.1 MAG: RNA-dependent RNA polymerase, partial [Partitiviridae sp.] diamond 177 48.1 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.
32798790 32798790 PRJNA631119_P_NODE_15440_length_326_cov_2.094862_g15322_i0 PRJNA631119 15440 326 2.094862 6.82925012 Soybean thrips partiti-like virus 9 2801011 Viruses Viruses 62.8 8.82e-9   NR QQO81405.1 2801011 g15322 i0 40 0.966257668711656 105 45 91.1 5 1 297 254 346 QQO81405.1 RNA-dependent RNA polymerase [Soybean thrips partiti-like virus 9] diamond 315 62.8 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Soybean thrips partiti-like virus 9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;