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contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA630877" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 36 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630877 · 36 ✖

analysis 1

  • diamond · 36 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26744935 26744935 PRJNA630877_S_NODE_100961_length_225_cov_1.429348_g81824_i0 PRJNA630877 100961 225 1.429348 3.216033 root 1 Root_unresolved Root_unresolved 43.9 0.0117   NR MBQ9860582.1 2044939 g81824 i0 41.4 1.37333333333333 58 33 77.3 1 222 49 213 269 MBQ9860582.1 FAD-binding protein [Clostridia bacterium] diamond 309 43.9 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
26954113 26954113 PRJNA630877_S_NODE_141742_length_165_cov_2.040323_g122605_i0 PRJNA630877 141742 165 2.040323 3.36653295 Paenibacillus terrae 159743 Bacteria Bacteria 39.7 0.0314   NR WP_082067300.1 159743 g122605 i0 41.3 0.836363636363636 46 27 83.6 0 20 157 1 46 WP_082067300.1 YczI family protein [Paenibacillus terrae] diamond 138 39.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus terrae
26998364 26998364 PRJNA630877_S_NODE_85562_length_270_cov_207.698690_g66425_i0 PRJNA630877 85562 270 207.69869 560.786463 root 1 Root_unresolved Root_unresolved 173 6.929999999999999e-54   NR MDK0657390.1 1502 g66425 i0 97.8 76.1222222222222 89 2 98.9 0 267 1 25 113 MDK0657390.1 30S ribosomal protein S8 [Clostridium perfringens] diamond 20553 174 0.994252873563218 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium perfringens
27143663 27143663 PRJNA630877_S_NODE_87682_length_263_cov_1.900901_g68545_i0 PRJNA630877 87682 263 1.900901 4.99936963 Bacillus nitratireducens 2026193 Bacteria Bacteria 43.9 0.0182   NR WP_098218964.1 2026193 g68545 i0 29 0.787072243346008 69 47 76.4 1 4 204 189 257 WP_098218964.1 class I adenylate-forming enzyme family protein [Bacillus nitratireducens] diamond 207 43.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus nitratireducens
27333907 27333907 PRJNA630877_S_NODE_117343_length_194_cov_1.437908_g98206_i0 PRJNA630877 117343 194 1.437908 2.78954152 Faecalicatena contorta 39482 Bacteria Bacteria 41.6 0.04   NR PWJ48735.1 39482 g98206 i0 41.5 0.819587628865979 53 29 78.9 1 36 188 37 89 PWJ48735.1 resolvase-like protein [Faecalicatena contorta] diamond 159 41.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena contorta
27491735 27491735 PRJNA630877_S_NODE_87383_length_264_cov_1.973094_g68246_i0 PRJNA630877 87383 264 1.973094 5.20896816 Ndongobacter massiliensis 1871025 Bacteria Bacteria 42.4 0.0155   NR WP_072513795.1 1871025 g68246 i0 36.7 0.556818181818182 49 20 55.7 1 94 240 20 57 WP_072513795.1 hypothetical protein [Ndongobacter massiliensis] diamond 147 42.4 1 Bacteria   Bacillati Bacillota       Ndongobacter Ndongobacter massiliensis
28249229 28249229 PRJNA630877_S_NODE_120666_length_189_cov_1.729730_g101529_i0 PRJNA630877 120666 189 1.72973 3.2691897 Paenibacillus xylanexedens 528191 Bacteria Bacteria 42 0.0337   NR WP_211081033.1 528191 g101529 i0 50 0.476190476190476 30 15 47.6 0 50 139 293 322 WP_211081033.1 glycoside hydrolase family 1 protein [Paenibacillus xylanexedens] diamond 90 42 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus xylanexedens
28249240 28249240 PRJNA630877_S_NODE_95686_length_238_cov_2.010152_g76549_i0 PRJNA630877 95686 238 2.010152 4.78416176 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 43.5 0.0185   NR MCD7733136.1 2485925 g76549 i0 38.2 0.69327731092437 55 31 65.5 1 13 168 264 318 MCD7733136.1 aldehyde dehydrogenase [Oscillospiraceae bacterium] diamond 165 43.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
28280810 28280810 PRJNA630877_S_NODE_113966_length_199_cov_1.702532_g94829_i0 PRJNA630877 113966 199 1.702532 3.38803868 Bacillota bacterium 1879010 Bacteria Bacteria 40.8 0.0453   NR HAX73374.1 1879010 g94829 i0 51.5 0.49748743718593 33 16 49.7 0 1 99 90 122 HAX73374.1 hypothetical protein [Bacillota bacterium] diamond 99 40.8 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
28691697 28691697 PRJNA630877_S_NODE_90707_length_253_cov_1.622642_g71570_i0 PRJNA630877 90707 253 1.622642 4.10528426 Weissella cibaria 137591 Bacteria Bacteria 42.7 0.0407   NR WP_134645004.1 137591 g71570 i0 43.9 0.782608695652174 66 32 78.3 3 50 247 57 117 WP_134645004.1 PTS transporter subunit IIC [Weissella cibaria] diamond 198 42.7 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Weissella Weissella cibaria
28723110 28723110 PRJNA630877_S_NODE_53067_length_523_cov_2.838174_g34216_i0 PRJNA630877 53067 523 2.838174 14.84365002 Propionispira arboris 84035 Bacteria Bacteria 45.8 0.0295   NR WP_177177518.1 84035 g34216 i0 29 0.395793499043977 69 42 39.6 2 257 463 30 91 WP_177177518.1 DUF2971 domain-containing protein [Propionispira arboris] diamond 207 45.8 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Propionispira Propionispira arboris
28754614 28754614 PRJNA630877_S_NODE_98547_length_231_cov_1.121053_g79410_i0 PRJNA630877 98547 231 1.121053 2.58963243 Ruminococcus sp. 41978 Bacteria Bacteria 44.3 0.00915   NR MDE6779940.1 41978 g79410 i0 33.9 1.61038961038961 62 40 79.2 1 183 1 28 89 MDE6779940.1 MFS transporter [Ruminococcus sp.] diamond 372 44.3 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Ruminococcus Ruminococcus sp.
28849147 28849147 PRJNA630877_S_NODE_127428_length_180_cov_2.690647_g108291_i0 PRJNA630877 127428 180 2.690647 4.8431646 Clostridioides difficile 1496 Bacteria Bacteria 39.7 0.0423   NR MDB2824139.1 1496 g108291 i0 42.9 0.816666666666667 49 25 76.7 1 145 8 2 50 MDB2824139.1 hypothetical protein [Clostridioides difficile] diamond 147 39.7 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Clostridioides Clostridioides difficile
29039026 29039026 PRJNA630877_S_NODE_80008_length_294_cov_4.110672_g60871_i0 PRJNA630877 80008 294 4.110672 12.08537568 Cytobacillus 2675230 Bacteria Bacteria 43.9 0.00337   NR WP_251174017.1 2675230 g60871 i0 51.3 0.397959183673469 39 19 39.8 0 42 158 17 55 WP_251174017.1 MULTISPECIES: hypothetical protein [Cytobacillus] diamond 117 43.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Cytobacillus  
29196791 29196791 PRJNA630877_S_NODE_156649_length_153_cov_1.098214_g137512_i0 PRJNA630877 156649 153 1.098214 1.68026742 Bacillota bacterium 1879010 Bacteria Bacteria 56.6 7.12e-8   NR HAX73373.1 1879010 g137512 i0 62.5 0.784313725490196 40 15 78.4 0 121 2 115 154 HAX73373.1 hypothetical protein [Bacillota bacterium] diamond 120 56.6 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
29196795 29196795 PRJNA630877_S_NODE_79649_length_296_cov_2.203922_g60512_i0 PRJNA630877 79649 296 2.203922 6.52360912 Clostridiales bacterium 41_21_two_genomes 1897044 Bacteria Bacteria 44.3 0.0205   NR OKZ54030.1 1897044 g60512 i0 38.3 0.608108108108108 60 33 60.8 2 208 29 923 978 OKZ54030.1 MAG: hypothetical protein BHV89_03730 [Clostridiales bacterium 41_21_two_genomes] diamond 180 44.3 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium 41_21_two_genomes
29228457 29228457 PRJNA630877_S_NODE_107409_length_211_cov_1.805882_g88272_i0 PRJNA630877 107409 211 1.805882 3.81041102 Clostridium beijerinckii 1520 Bacteria Bacteria 42 0.0463   NR WP_077830974.1 1520 g88272 i0 37.7 0.753554502369668 53 33 75.4 0 174 16 404 456 WP_077830974.1 DNA primase family protein [Clostridium beijerinckii] diamond 159 42 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium beijerinckii
29259590 29259590 PRJNA630877_S_NODE_84769_length_274_cov_1.257511_g65632_i0 PRJNA630877 84769 274 1.257511 3.44558014 Virgibacillus profundi 2024555 Bacteria Bacteria 42.4 0.014   NR WP_095656099.1 2024555 g65632 i0 42.9 0.45985401459854 42 24 46 0 175 50 46 87 WP_095656099.1 30S ribosomal protein S20 [Virgibacillus profundi] diamond 126 42.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Virgibacillus Virgibacillus profundi
29449008 29449008 PRJNA630877_S_NODE_64110_length_399_cov_1.659218_g44979_i0 PRJNA630877 64110 399 1.659218 6.62027982 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 45.4 0.019   NR MCI8594386.1 2485925 g44979 i0 41.9 0.466165413533835 62 34 46.6 1 275 90 93 152 MCI8594386.1 calcium/sodium antiporter [Oscillospiraceae bacterium] diamond 186 45.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
29575306 29575306 PRJNA630877_S_NODE_101490_length_224_cov_0.934426_g82353_i0 PRJNA630877 101490 224 0.934426 2.09311424 Acetobacterium sp. 1872094 Bacteria Bacteria 40.4 0.0394   NR WP_373484389.1 1872094 g82353 i0 65.2 0.308035714285714 23 8 30.8 0 121 53 1 23 WP_373484389.1 type II toxin-antitoxin system Phd/YefM family antitoxin [Acetobacterium sp.] diamond 69 40.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Eubacteriaceae Acetobacterium Acetobacterium sp.
29575308 29575308 PRJNA630877_S_NODE_33990_length_924_cov_2.363533_g19179_i0 PRJNA630877 33990 924 2.363533 21.83904492 Staphylococcus aureus 1280 Bacteria Bacteria 133 3.7e-34   NR WP_220123406.1 1280 g19179 i0 54 0.487012987012987 150 60 45.8 4 617 195 11 160 WP_220123406.1 hypothetical protein, partial [Staphylococcus aureus] diamond 450 133 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
29796412 29796412 PRJNA630877_S_NODE_86531_length_267_cov_2.238938_g67394_i0 PRJNA630877 86531 267 2.238938 5.97796446 Butyricicoccus sp. 1XD8-22 2320083 Bacteria Bacteria 41.2 0.0441   NR RKJ80018.1 2320083 g67394 i0 32.4 0.831460674157303 74 48 80.9 1 224 9 26 99 RKJ80018.1 hypothetical protein D7X33_06850 [Butyricicoccus sp. 1XD8-22] diamond 222 41.2 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Butyricicoccaceae Butyricicoccus Butyricicoccus sp. 1XD8-22
29986092 29986092 PRJNA630877_S_NODE_91511_length_250_cov_3.818182_g72374_i0 PRJNA630877 91511 250 3.818182 9.545455 Congzhengia minquanensis 2763657 Bacteria Bacteria 42 0.0308   NR WP_249311934.1 2763657 g72374 i0 44.7 0.564 47 22 56.4 1 63 203 17 59 WP_249311934.1 YopX family protein [Congzhengia minquanensis] diamond 141 42 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Congzhengia Congzhengia minquanensis
30428782 30428782 PRJNA630877_S_NODE_128573_length_179_cov_1.594203_g109436_i0 PRJNA630877 128573 179 1.594203 2.85362337 Lachnospiraceae bacterium 1898203 Bacteria Bacteria 41.6 0.0412   NR MBO4882013.1 1898203 g109436 i0 41 0.653631284916201 39 23 65.4 0 44 160 125 163 MBO4882013.1 transglutaminase domain-containing protein [Lachnospiraceae bacterium] diamond 117 41.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
30428783 30428783 PRJNA630877_S_NODE_131813_length_175_cov_2.537313_g112676_i0 PRJNA630877 131813 175 2.537313 4.44029775 Bacillota bacterium 1879010 Bacteria Bacteria 40.4 0.0277   NR MBQ4234116.1 1879010 g112676 i0 43.2 0.634285714285714 37 21 63.4 0 115 5 56 92 MBQ4234116.1 hypothetical protein [Bacillota bacterium] diamond 111 40.4 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
30554630 30554630 PRJNA630877_S_NODE_39153_length_789_cov_4.604278_g22728_i0 PRJNA630877 39153 789 4.604278 36.32775342 Listeria monocytogenes 1639 Bacteria Bacteria 48.9 0.0016   NR WP_369698193.1 1639 g22728 i0 39.7 0.220532319391635 58 27 22.1 1 466 639 8 57 WP_369698193.1 hypothetical protein, partial [Listeria monocytogenes] diamond 174 48.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes
30554634 30554634 PRJNA630877_S_NODE_71093_length_344_cov_2.059406_g51956_i0 PRJNA630877 71093 344 2.059406 7.08435664 Epulopiscium sp. Nele67-Bin 3100283 Bacteria Bacteria 55.1 3.42e-7   NR OON94403.1 1764960 g51956 i0 52.5 0.348837209302326 40 19 34.9 0 3 122 24 63 OON94403.1 MAG: hypothetical protein ATN33_00305 [Epulopiscium sp. Nele67-Bin001] diamond 120 55.1 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Candidatus Parepulonipiscium Candidatus Parepulonipiscium sp. PG-Nele67M_MBin01
31154771 31154771 PRJNA630877_S_NODE_88415_length_260_cov_6.027397_g69278_i0 PRJNA630877 88415 260 6.027397 15.6712322 Butyrivibrio sp. 28121 Bacteria Bacteria 43.9 0.0144   NR MBE5842693.1 28121 g69278 i0 41.5 0.473076923076923 41 24 47.3 0 107 229 164 204 MBE5842693.1 hypothetical protein [Butyrivibrio sp.] diamond 123 43.9 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio sp.
31566486 31566486 PRJNA630877_S_NODE_100396_length_226_cov_2.037838_g81259_i0 PRJNA630877 100396 226 2.037838 4.60551388 Bacillota bacterium 1879010 Bacteria Bacteria 41.2 0.0464   NR HBS93135.1 1879010 g81259 i0 43.2 0.491150442477876 37 21 49.1 0 97 207 90 126 HBS93135.1 hypothetical protein [Bacillota bacterium] diamond 111 41.2 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
31629519 31629519 PRJNA630877_S_NODE_100856_length_225_cov_1.847826_g81719_i0 PRJNA630877 100856 225 1.847826 4.1576085 Ruminiclostridium sp. 2053608 Bacteria Bacteria 42.4 0.0391   NR MCI8604288.1 2053608 g81719 i0 40 0.866666666666667 65 36 82.7 2 24 209 75 139 MCI8604288.1 hypothetical protein [Ruminiclostridium sp.] diamond 195 42.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Ruminiclostridium Ruminiclostridium sp.
31660944 31660944 PRJNA630877_S_NODE_89797_length_256_cov_1.506977_g70660_i0 PRJNA630877 89797 256 1.506977 3.85786112 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 42.7 0.0443   NR MEG1782742.1 2485925 g70660 i0 39.7 0.6796875 58 33 65.6 1 74 241 460 517 MEG1782742.1 glycosyltransferase family 2 protein [Oscillospiraceae bacterium] diamond 174 42.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
31850807 31850807 PRJNA630877_S_NODE_69657_length_354_cov_2.581470_g50520_i0 PRJNA630877 69657 354 2.58147 9.1384038 Clostridium tetani 1513 Bacteria Bacteria 46.2 0.00309   NR WP_011100072.1 1513 g50520 i0 34.4 0.516949152542373 61 40 51.7 0 118 300 79 139 WP_011100072.1 MarR family transcriptional regulator [Clostridium tetani] diamond 183 46.2 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium tetani
32180040 32180040 PRJNA630877_S_NODE_146038_length_161_cov_2.483333_g126901_i0 PRJNA630877 146038 161 2.483333 3.99816613 root 1 Root_unresolved Root_unresolved 111 5.69e-28   NR WP_208689408.1 1280 g126901 i0 98.1 311.068322981366 53 1 98.8 0 159 1 109 161 WP_208689408.1 hypothetical protein [Staphylococcus aureus] diamond 50082 111 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
32199000 32199000 PRJNA630877_S_NODE_126098_length_182_cov_1.560284_g106961_i0 PRJNA630877 126098 182 1.560284 2.83971688 Cytobacillus firmus 1399 Bacteria Bacteria 43.1 0.012   NR WP_159344617.1 1399 g106961 i0 36.8 0.93956043956044 57 34 94 1 178 8 53 107 WP_159344617.1 4-hydroxybenzoate 3-monooxygenase [Cytobacillus firmus] diamond 171 43.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Cytobacillus Cytobacillus firmus
32515637 32515637 PRJNA630877_S_NODE_68839_length_360_cov_1.677116_g49702_i0 PRJNA630877 68839 360 1.677116 6.0376176 Oscillibacter sp. 1945593 Bacteria Bacteria 42 0.0498   NR MCI9001458.1 1945593 g49702 i0 38.3 0.5 60 34 47.5 1 124 294 24 83 MCI9001458.1 hypothetical protein [Oscillibacter sp.] diamond 180 42 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Oscillibacter Oscillibacter sp.
32704374 32704374 PRJNA630877_S_NODE_101300_length_224_cov_1.830601_g82163_i0 PRJNA630877 101300 224 1.830601 4.10054624 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 42.7 0.0285   NR MDR1928157.1 2485925 g82163 i0 38.3 0.629464285714286 47 26 62.9 1 1 141 223 266 MDR1928157.1 iron-containing alcohol dehydrogenase [Oscillospiraceae bacterium] diamond 141 42.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;