RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630162 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30933989 30933989 PRJNA630162_P_NODE_96174_length_188_cov_1.302158_g94651_i0 PRJNA630162 96174 188 1.302158 2.44805704 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 53.5 1.03e-6   NR MFA5506959.1 3107663 g94651 i0 52.7 0.877659574468085 55 18 87.8 2 18 182 1 47 MFA5506959.1 terminase small subunit [Vulcanimicrobiota bacterium] diamond 165 53.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31028740 31028740 PRJNA630162_P_NODE_140475_length_167_cov_0.881356_g138952_i0 PRJNA630162 140475 167 0.881356 1.47186452 Candidatus Lustribacter sp. 3069335 Bacteria Bacteria 67 1.85e-12   NR HEV8021464.1 3069335 g138952 i0 57.7 1.8502994011976 52 21 93.4 1 165 10 6 56 HEV8021464.1 6-carboxytetrahydropterin synthase QueD [Candidatus Lustribacter sp.] diamond 309 67 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Lustribacter Candidatus Lustribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;