RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17179481 17179481 PRJNA630162_P_NODE_121214_length_174_cov_1.200000_g119691_i0 PRJNA630162 121214 174 1.2 2.088 root 1 Root_unresolved Root_unresolved 102 4.04e-26   NR KAJ4457095.1 342808 g119691 i0 74.1 5 58 15 100 0 174 1 52 109 KAJ4457095.1 putative 40S ribosomal protein S15a [Paratrimastix pyriformis] diamond 870 103 0.990291262135922 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29228399 29228399 PRJNA630162_P_NODE_62069_length_224_cov_3.102857_g60546_i0 PRJNA630162 62069 224 3.102857 6.95039968 Streblomastix strix 222440 Preaxostyla other_Eukaryota 64.7 1.27e-10   NR KAA6397624.1 222440 g60546 i0 52.1 0.950892857142857 71 32 95.1 2 223 11 124 192 KAA6397624.1 MAG: hypothetical protein EZS28_006851 [Streblomastix strix] diamond 213 64.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
30839063 30839063 PRJNA630162_P_NODE_54274_length_239_cov_2.568421_g52751_i0 PRJNA630162 54274 239 2.568421 6.13852619 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 45.8 0.0015   NR KAK2942687.1 2049346 g52751 i0 67.6 0.426778242677824 34 11 42.7 0 2 103 39 72 KAK2942687.1 hypothetical protein BLNAU_22414 [Blattamonas nauphoetae] diamond 102 45.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
31060428 31060428 PRJNA630162_P_NODE_135835_length_168_cov_0.873950_g134312_i0 PRJNA630162 135835 168 0.87395 1.468236 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 107 8.090000000000001e-27   NR XP_067728167.1 2049356 g134312 i0 84.9 1.89285714285714 53 8 94.6 0 9 167 201 253 XP_067728167.1 putative endopeptidase LytF [Monocercomonoides exilis] diamond 318 107 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;