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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1877851 1877851 PRJNA630162_P_NODE_143782_length_166_cov_0.888889_g142259_i0 PRJNA630162 143782 166 0.888889 1.47555574 Schistosoma mattheei 31246 Platyhelminthes Platyhelminthes 65.9 6.61e-12   NR VDP63819.1 31246 g142259 i0 55.6 5.85542168674699 54 22 94 1 160 5 38 91 VDP63819.1 unnamed protein product [Schistosoma mattheei] diamond 972 65.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mattheei
4429460 4429460 PRJNA630162_P_NODE_151124_length_164_cov_1.408696_g149601_i0 PRJNA630162 151124 164 1.408696 2.31026144 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 82.4 1.28e-16   NR KAH9282779.1 6210 g149601 i0 92.3 19.8475609756098 39 3 71.3 0 117 1 380 418 KAH9282779.1 tRNA-splicing ligase RtcB -like protein [Echinococcus granulosus] diamond 3255 82.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
12082068 12082068 PRJNA630162_P_NODE_77270_length_205_cov_0.967949_g75747_i0 PRJNA630162 77270 205 0.967949 1.98429545 Metazoa 33208 Platyhelminthes Platyhelminthes 134 1.17e-37   NR Q26537.1 6183 g75747 i0 98.5 3.98048780487805 68 1 99.5 0 1 204 60 127 Q26537.1 RecName: Full=14-3-3 protein homolog 2; Short=14-3-3-2 [Schistosoma mansoni] diamond 816 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
26795867 26795867 PRJNA630162_P_NODE_125781_length_171_cov_2.483607_g124258_i0 PRJNA630162 125781 171 2.483607 4.24696797 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 67 1.46e-11   NR PAA47301.1 282301 g124258 i0 62 7.78947368421053 50 19 87.7 0 169 20 72 121 PAA47301.1 hypothetical protein BOX15_Mlig018086g7, partial [Macrostomum lignano] diamond 1332 67 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
27409686 27409686 PRJNA630162_P_NODE_67763_length_215_cov_1.656627_g66240_i0 PRJNA630162 67763 215 1.656627 3.56174805 Metazoa 33208 Platyhelminthes Platyhelminthes 42.4 0.036   NR RTG86495.1 6184 g66240 i0 58.1 1.75813953488372 31 13 43.3 0 109 17 810 840 RTG86495.1 E3 ubiquitin-protein ligase mind-bomb [Schistosoma bovis] diamond 378 42.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma bovis
28091406 28091406 PRJNA630162_P_NODE_54185_length_239_cov_3.810526_g52662_i0 PRJNA630162 54185 239 3.810526 9.10715714 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 43.5 0.0193   NR CDS26308.1 85433 g52662 i0 44.3 1.38075313807531 61 34 76.6 0 202 20 326 386 CDS26308.1 dnaJ subfamily B [Hymenolepis microstoma] diamond 330 43.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
28407255 28407255 PRJNA630162_P_NODE_39366_length_284_cov_1.276596_g37843_i0 PRJNA630162 39366 284 1.276596 3.62553264 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 92.8 1.19e-22   NR PAA52392.1 282301 g37843 i0 72.9 0.623239436619718 59 16 62.3 0 235 59 1 59 PAA52392.1 hypothetical protein BOX15_Mlig007628g1 [Macrostomum lignano] diamond 177 92.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
29209367 29209367 PRJNA630162_P_NODE_91309_length_191_cov_1.373239_g89786_i0 PRJNA630162 91309 191 1.373239 2.62288649 Opisthorchiidae 6196 Platyhelminthes Platyhelminthes 48.5 1.69e-4   NR XP_009167273.1 6198 g89786 i0 45.2 1.97905759162304 42 23 66 0 65 190 410 451 XP_009167273.1 hypothetical protein T265_04310 [Opisthorchis viverrini] diamond 378 48.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
29543721 29543721 PRJNA630162_P_NODE_25310_length_363_cov_4.636943_g23790_i0 PRJNA630162 25310 363 4.636943 16.83210309 Taenia asiatica 60517 Platyhelminthes Platyhelminthes 59.3 9.47e-9   NR VDK22860.1 60517 g23790 i0 48.4 0.528925619834711 64 21 52.9 1 195 4 11 62 VDK22860.1 unnamed protein product [Taenia asiatica] diamond 192 59.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia asiatica
29669644 29669644 PRJNA630162_P_NODE_109830_length_180_cov_1.236641_g108307_i0 PRJNA630162 109830 180 1.236641 2.2259538 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 92 4.83e-20   NR PAA71470.1 282301 g108307 i0 65.5 5.78333333333333 58 20 96.7 0 174 1 233 290 PAA71470.1 hypothetical protein BOX15_Mlig022730g1 [Macrostomum lignano] diamond 1041 92 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
29777440 29777440 PRJNA630162_P_NODE_78971_length_202_cov_3.241830_g77448_i0 PRJNA630162 78971 202 3.24183 6.5484966 Metazoa 33208 Platyhelminthes Platyhelminthes 41.6 0.0107   NR TNN12668.1 6182 g77448 i0 52.5 1.18811881188119 40 19 59.4 0 201 82 5 44 TNN12668.1 hypothetical protein EWB00_003574 [Schistosoma japonicum] diamond 240 41.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
29827877 29827877 PRJNA630162_P_NODE_152151_length_164_cov_0.904348_g150628_i0 PRJNA630162 152151 164 0.904348 1.48313072 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 40.4 0.0264   NR XP_018651663.1 6183 g150628 i0 46.3 0.75 41 21 73.2 1 130 11 3 43 XP_018651663.1 hypothetical protein Smp_150130 [Schistosoma mansoni] diamond 123 40.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
31294056 31294056 PRJNA630162_P_NODE_160815_length_162_cov_0.920354_g159292_i0 PRJNA630162 160815 162 0.920354 1.49097348 Metazoa 33208 Platyhelminthes Platyhelminthes 99.4 3.9399999999999996e-23   NR THD21631.1 6192 g159292 i0 78.8 18.2777777777778 52 11 96.3 0 156 1 265 316 THD21631.1 Choline-phosphate cytidylyltransferase B [Fasciola hepatica] diamond 2961 99.8 0.995991983967936 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
31420632 31420632 PRJNA630162_P_NODE_57836_length_232_cov_1.480874_g56313_i0 PRJNA630162 57836 232 1.480874 3.43562768 root 1 Root_unresolved Root_unresolved 70.1 7.17e-12   NR CAH8455079.1 6185 g56313 i0 45.3 4.84913793103448 75 41 97 0 227 3 29 103 CAH8455079.1 unnamed protein product [Schistosoma haematobium] diamond 1125 70.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
31736797 31736797 PRJNA630162_P_NODE_77737_length_204_cov_1.851613_g76214_i0 PRJNA630162 77737 204 1.851613 3.77729052 Metazoa 33208 Platyhelminthes Platyhelminthes 55.5 2.69e-7   NR VDN98320.1 102285 g76214 i0 48.3 2.70588235294118 58 30 85.3 0 19 192 13 70 VDN98320.1 unnamed protein product [Rodentolepis nana] diamond 552 55.8 0.99462365591397806 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Rodentolepis Rodentolepis nana
32736085 32736085 PRJNA630162_P_NODE_38880_length_286_cov_1.578059_g37357_i0 PRJNA630162 38880 286 1.578059 4.51324874 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 47.4 2.23e-4   NR XP_018645103.1 6183 g37357 i0 56.5 0.482517482517482 46 19 48.3 1 85 222 7 51 XP_018645103.1 unnamed protein product [Schistosoma mansoni] diamond 138 47.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;