contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Lentisphaerota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26681816 | 26681816 | PRJNA630162_P_NODE_138081_length_167_cov_1.864407_g136558_i0 | PRJNA630162 | 138081 | 167 | 1.864407 | 3.11355969 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 102 | 1.69e-23 | NR | NLL83912.1 | 1932692 | g136558 | i0 | 79.6 | 6.79041916167665 | 54 | 11 | 97 | 0 | 5 | 166 | 234 | 287 | NLL83912.1 phosphoenolpyruvate carboxykinase (GTP) [Lentisphaerota bacterium] | diamond | 1134 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 27017387 | 27017387 | PRJNA630162_P_NODE_156022_length_163_cov_0.912281_g154499_i0 | PRJNA630162 | 156022 | 163 | 0.912281 | 1.48701803 | Victivallales bacterium | 2212475 | Bacteria | Bacteria | 77.8 | 2.51e-15 | NR | MDD3118209.1 | 2212475 | g154499 | i0 | 67.9 | 5.85276073619632 | 53 | 17 | 97.5 | 0 | 161 | 3 | 210 | 262 | MDD3118209.1 signal recognition particle-docking protein FtsY [Victivallales bacterium] | diamond | 954 | 77.8 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium | |||
| 27112288 | 27112288 | PRJNA630162_P_NODE_71522_length_212_cov_2.233129_g69999_i0 | PRJNA630162 | 71522 | 212 | 2.233129 | 4.73423348 | Lentisphaeraceae bacterium | 2461380 | Bacteria | Bacteria | 44.3 | 0.00224 | NR | MCM8539258.1 | 2461380 | g69999 | i0 | 63 | 0.382075471698113 | 27 | 10 | 38.2 | 0 | 21 | 101 | 35 | 61 | MCM8539258.1 hypothetical protein [Lentisphaeraceae bacterium] | diamond | 81 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaerales | Lentisphaeraceae | Lentisphaeraceae bacterium | ||
| 28880786 | 28880786 | PRJNA630162_P_NODE_93088_length_190_cov_1.241135_g91565_i0 | PRJNA630162 | 93088 | 190 | 1.241135 | 2.3581565 | Victivallales bacterium | 2212475 | Bacteria | Bacteria | 83.2 | 4.85e-17 | NR | HJO92920.1 | 2212475 | g91565 | i0 | 65.6 | 0.963157894736842 | 61 | 21 | 96.3 | 0 | 8 | 190 | 103 | 163 | HJO92920.1 Gfo/Idh/MocA family oxidoreductase [Victivallales bacterium] | diamond | 183 | 83.2 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium | |||
| 29038847 | 29038847 | PRJNA630162_P_NODE_127828_length_170_cov_2.479339_g126305_i0 | PRJNA630162 | 127828 | 170 | 2.479339 | 4.2148763 | Victivallis lenta | 2606640 | Bacteria | Bacteria | 72.8 | 1.15e-13 | NR | WP_273306626.1 | 2606640 | g126305 | i0 | 71.2 | 0.917647058823529 | 52 | 15 | 91.8 | 0 | 9 | 164 | 17 | 68 | WP_273306626.1 phage antirepressor [Victivallis lenta] | diamond | 156 | 72.8 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallaceae | Victivallis | Victivallis lenta | |
| 29985918 | 29985918 | PRJNA630162_P_NODE_143671_length_166_cov_0.888889_g142148_i0 | PRJNA630162 | 143671 | 166 | 0.888889 | 1.47555574 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 102 | 9.21e-24 | NR | MBR7138624.1 | 2053569 | g142148 | i0 | 94.2 | 1.87951807228916 | 52 | 3 | 94 | 0 | 157 | 2 | 4 | 55 | MBR7138624.1 elongation factor G [Lentisphaeria bacterium] | diamond | 312 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 30206931 | 30206931 | PRJNA630162_P_NODE_78232_length_203_cov_3.103896_g76709_i0 | PRJNA630162 | 78232 | 203 | 3.103896 | 6.30090888 | Victivallales bacterium | 2212475 | Bacteria | Bacteria | 42.4 | 0.0295 | NR | MBQ7651300.1 | 2212475 | g76709 | i0 | 34 | 0.783251231527094 | 53 | 30 | 70.9 | 1 | 166 | 23 | 2 | 54 | MBQ7651300.1 hypothetical protein [Victivallales bacterium] | diamond | 159 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium | |||
| 31344868 | 31344868 | PRJNA630162_P_NODE_65116_length_219_cov_1.947059_g63593_i0 | PRJNA630162 | 65116 | 219 | 1.947059 | 4.26405921 | Lentisphaerae bacterium GWF2_5 | 1932692 | Bacteria | Bacteria | 136 | 1.84e-35 | NR | OGV57835.1 | 1798574 | g63593 | i0 | 93 | 0.972602739726027 | 71 | 5 | 97.3 | 0 | 215 | 3 | 248 | 318 | OGV57835.1 MAG: hypothetical protein A2X45_20070 [Lentisphaerae bacterium GWF2_50_93] | diamond | 213 | 136 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerae bacterium GWF2_50_93 | |||||
| 31660844 | 31660844 | PRJNA630162_P_NODE_40557_length_279_cov_2.365217_g39034_i0 | PRJNA630162 | 40557 | 279 | 2.365217 | 6.59895543 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 118 | 1.27e-28 | NR | MDT8390606.1 | 2053569 | g39034 | i0 | 58.7 | 1.95698924731183 | 92 | 36 | 96.8 | 1 | 277 | 8 | 694 | 785 | MDT8390606.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Lentisphaeria bacterium] | diamond | 546 | 118 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 31724081 | 31724081 | PRJNA630162_P_NODE_124317_length_172_cov_1.658537_g122794_i0 | PRJNA630162 | 124317 | 172 | 1.658537 | 2.85268364 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 92.4 | 3.9900000000000005e-21 | NR | MEI6422123.1 | 1932692 | g122794 | i0 | 82.4 | 1.77906976744186 | 51 | 9 | 89 | 0 | 168 | 16 | 202 | 252 | MEI6422123.1 sugar phosphate isomerase/epimerase [Lentisphaerota bacterium] | diamond | 306 | 92.4 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 32135614 | 32135614 | PRJNA630162_P_NODE_143978_length_166_cov_0.888889_g142455_i0 | PRJNA630162 | 143978 | 166 | 0.888889 | 1.47555574 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 98.2 | 3.73e-22 | NR | NLF17510.1 | 1932692 | g142455 | i0 | 86.8 | 0.957831325301205 | 53 | 7 | 95.8 | 0 | 161 | 3 | 380 | 432 | NLF17510.1 AMP-binding protein [Lentisphaerota bacterium] | diamond | 159 | 98.2 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 32483776 | 32483776 | PRJNA630162_P_NODE_70759_length_212_cov_2.674847_g69236_i0 | PRJNA630162 | 70759 | 212 | 2.674847 | 5.67067564 | Lentisphaerae bacterium RIFOXYA12_FULL_48_11 | 1798578 | Bacteria | Bacteria | 48.1 | 8.99e-5 | NR | OGV64821.1 | 1798578 | g69236 | i0 | 76.7 | 1.38679245283019 | 30 | 7 | 42.5 | 0 | 13 | 102 | 25 | 54 | OGV64821.1 MAG: 30S ribosomal protein S8 [Lentisphaerae bacterium RIFOXYA12_FULL_48_11] | diamond | 294 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerae bacterium RIFOXYA12_FULL_48_11 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;