RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12081728 12081728 PRJNA630162_P_NODE_44850_length_264_cov_2.827907_g43327_i0 PRJNA630162 44850 264 2.827907 7.46567448 root 1 Root_unresolved Root_unresolved 110 9.76e-26   NR CAG4717834.1 5763 g43327 i0 71.8 15.7727272727273 71 20 80.7 0 259 47 564 634 CAG4717834.1 unnamed protein product [Naegleria fowleri] diamond 4164 111 0.990990990990991 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
22279853 22279853 PRJNA630162_P_NODE_86818_length_194_cov_2.172414_g85295_i0 PRJNA630162 86818 194 2.172414 4.21448316 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 125 3.2400000000000004e-33   NR XP_044557880.1 5763 g85295 i0 93.5 1.91752577319588 62 4 95.9 0 192 7 49 110 XP_044557880.1 uncharacterized protein FDP41_008374 [Naegleria fowleri] diamond 372 125 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25377630 25377630 PRJNA630162_P_NODE_145620_length_165_cov_2.655172_g144097_i0 PRJNA630162 145620 165 2.655172 4.3810338 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.1 1.72e-22   NR XP_044557880.1 5763 g144097 i0 79.2 21.9818181818182 53 11 96.4 0 161 3 52 104 XP_044557880.1 uncharacterized protein FDP41_008374 [Naegleria fowleri] diamond 3627 97.8 0.992842535787321 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26859570 26859570 PRJNA630162_P_NODE_166641_length_157_cov_3.796296_g165118_i0 PRJNA630162 166641 157 3.796296 5.96018472 Acrasis kona 1008807 Heterolobosea other_Eukaryota 56.6 1.48e-7   NR KAL0487717.1 1008807 g165118 i0 62.2 0.859872611464968 45 17 86 0 14 148 509 553 KAL0487717.1 PV21 [Acrasis kona] diamond 135 56.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27112130 27112130 PRJNA630162_P_NODE_124022_length_172_cov_2.048780_g122499_i0 PRJNA630162 124022 172 2.04878 3.5239016 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 68.6 1.14e-11   NR XP_002673389.1 5762 g122499 i0 66.1 0.976744186046512 56 17 94.2 1 163 2 369 424 XP_002673389.1 kinesin-3 [Naegleria gruberi] diamond 168 68.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27251476 27251476 PRJNA630162_P_NODE_96623_length_187_cov_4.347826_g95100_i0 PRJNA630162 96623 187 4.347826 8.13043462 root 1 Root_unresolved Root_unresolved 72 8.1e-13   NR XP_044566415.1 5763 g95100 i0 50 8.0213903743315509 60 30 96.3 0 182 3 403 462 XP_044566415.1 uncharacterized protein FDP41_012359 [Naegleria fowleri] diamond 1500 72.4 0.994475138121547 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27428565 27428565 PRJNA630162_P_NODE_148163_length_165_cov_0.896552_g146640_i0 PRJNA630162 148163 165 0.896552 1.4793108 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 47.8 2.17e-4   NR XP_044562835.1 5763 g146640 i0 47.2 0.963636363636364 53 28 96.4 0 3 161 5 57 XP_044562835.1 uncharacterized protein FDP41_002637 [Naegleria fowleri] diamond 159 47.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28514583 28514583 PRJNA630162_P_NODE_107707_length_181_cov_1.454545_g106184_i0 PRJNA630162 107707 181 1.454545 2.63272645 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.7 2.65e-17   NR XP_002674786.1 5762 g106184 i0 78.3 5.25414364640884 46 10 76.2 0 177 40 1295 1340 XP_002674786.1 uncharacterized protein NAEGRDRAFT_80526 [Naegleria gruberi] diamond 951 84.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29020075 29020075 PRJNA630162_P_NODE_99428_length_186_cov_1.364964_g97905_i0 PRJNA630162 99428 186 1.364964 2.53883304 root 1 Root_unresolved Root_unresolved 100 4.15e-25   NR XP_044563356.1 5763 g97905 i0 85.7 31.6129032258065 56 8 90.3 0 168 1 64 119 XP_044563356.1 uncharacterized protein FDP41_002463 [Naegleria fowleri] diamond 5880 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29133534 29133534 PRJNA630162_P_NODE_149729_length_164_cov_2.669565_g148206_i0 PRJNA630162 149729 164 2.669565 4.3780866 Acrasis kona 1008807 Heterolobosea other_Eukaryota 61.6 2.76e-9   NR KAL0484804.1 1008807 g148206 i0 73.5 0.621951219512195 34 9 62.2 0 117 16 450 483 KAL0484804.1 ctnA [Acrasis kona] diamond 102 61.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30315053 30315053 PRJNA630162_P_NODE_105112_length_182_cov_3.045113_g103589_i0 PRJNA630162 105112 182 3.045113 5.54210566 Naegleria 5761 Heterolobosea other_Eukaryota 94.7 1.8899999999999994e-23   NR CAG4711774.1 5763 g103589 i0 78.4 3.36263736263736 51 11 84.1 0 6 158 59 109 CAG4711774.1 unnamed protein product, partial [Naegleria fowleri] diamond 612 94.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31091911 31091911 PRJNA630162_P_NODE_96355_length_188_cov_1.187050_g94832_i0 PRJNA630162 96355 188 1.18705 2.231654 Acrasis kona 1008807 Heterolobosea other_Eukaryota 51.6 1.32e-5   NR YP_009117126.1 1008807 g94832 i0 36.9 1.03723404255319 65 38 98.9 1 3 188 226 290 YP_009117126.1 ATP synthase F1 subunit alpha [Acrasis kona] diamond 195 51.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31249823 31249823 PRJNA630162_P_NODE_80975_length_200_cov_2.238411_g79452_i0 PRJNA630162 80975 200 2.238411 4.476822 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 47.8 3.48e-4   NR XP_002674994.1 5762 g79452 i0 45.5 1.575 55 27 82.5 1 187 23 31 82 XP_002674994.1 uncharacterized protein NAEGRDRAFT_83230 [Naegleria gruberi] diamond 315 47.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32874435 32874435 PRJNA630162_P_NODE_145800_length_165_cov_2.370690_g144277_i0 PRJNA630162 145800 165 2.37069 3.9116385 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.9 2.72e-5   NR XP_002670063.1 5762 g144277 i0 78.6 5.18181818181818 28 6 50.9 0 155 72 112 139 XP_002670063.1 uncharacterized protein NAEGRDRAFT_74918 [Naegleria gruberi] diamond 855 49.3 0.991886409736308 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;