RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630162 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26605717 26605717 PRJNA630162_P_NODE_39281_length_284_cov_2.344681_g37758_i0 PRJNA630162 39281 284 2.344681 6.65889404 parvo-like hybrid virus 3367306 Viruses Viruses 142 2.0999999999999999e-38   NR XHS97074.1 3367306 g37758 i0 78.3 0.971830985915493 92 20 97.2 0 277 2 112 203 XHS97074.1 replication protein [parvo-like hybrid virus] diamond 276 142 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   parvo-like hybrid virus
27460191 27460191 PRJNA630162_P_NODE_77323_length_204_cov_16.606452_g75800_i0 PRJNA630162 77323 204 16.606452 33.87716208 Parvoviridae sp. 1940570 Viruses Viruses 44.7 0.00456   NR XNT21158.1 1940570 g75800 i0 51.1 0.661764705882353 45 22 66.2 0 175 41 358 402 XNT21158.1 MAG: replication protein [Parvoviridae sp.] diamond 135 44.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
30112223 30112223 PRJNA630162_P_NODE_16732_length_457_cov_2.938725_g15229_i0 PRJNA630162 16732 457 2.938725 13.42997325 Psittacidae aveparvovirus 2794556 Viruses Viruses 92 1.21e-18   NR QTE03751.1 2794556 g15229 i0 39.3 0.800875273522976 122 58 78.1 3 97 453 16 124 QTE03751.1 MAG: replication protein [Psittacidae aveparvovirus] diamond 366 92 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;