RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Vogeliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Vogeliibacteriota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27712935 27712935 PRJNA630162_P_NODE_164984_length_159_cov_2.509091_g163461_i0 PRJNA630162 164984 159 2.509091 3.98945469 Candidatus Vogelbacteria bacterium CG1 2053638 Bacteria Bacteria 48.9 8.1e-6   NR PIR46661.1 1975042 g163461 i0 68.6 0.660377358490566 35 11 66 0 5 109 47 81 PIR46661.1 MAG: hypothetical protein COV07_03270 [Candidatus Vogelbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_45_14] diamond 105 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_45_14
29891447 29891447 PRJNA630162_P_NODE_94891_length_189_cov_0.914286_g93368_i0 PRJNA630162 94891 189 0.914286 1.72800054 Candidatus Vogelbacteria bacterium 2053638 Bacteria Bacteria 44.3 0.00108   NR MBI2100297.1 2053638 g93368 i0 53.3 0.714285714285714 45 21 71.4 0 1 135 27 71 MBI2100297.1 hypothetical protein [Candidatus Vogelbacteria bacterium] diamond 135 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium
31186338 31186338 PRJNA630162_P_NODE_38815_length_286_cov_2.320675_g37292_i0 PRJNA630162 38815 286 2.320675 6.6371305 Candidatus Vogelbacteria bacterium 2053638 Bacteria Bacteria 61.6 5.62e-10   NR MBI2100297.1 2053638 g37292 i0 68.9 0.472027972027972 45 14 47.2 0 8 142 15 59 MBI2100297.1 hypothetical protein [Candidatus Vogelbacteria bacterium] diamond 135 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium
31660808 31660808 PRJNA630162_P_NODE_167897_length_156_cov_3.056075_g166374_i0 PRJNA630162 167897 156 3.056075 4.767477 Candidatus Vogelbacteria bacterium 2053638 Bacteria Bacteria 52 1.26e-6   NR HCQ92207.1 2053638 g166374 i0 68.4 1.5 38 12 73.1 0 20 133 68 105 HCQ92207.1 hypothetical protein [Candidatus Vogelbacteria bacterium] diamond 234 52 1 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium
31914086 31914086 PRJNA630162_P_NODE_49957_length_249_cov_4.980000_g48434_i0 PRJNA630162 49957 249 4.98 12.4002 Candidatus Vogelbacteria bacterium 2053638 Bacteria Bacteria 50.1 1.23e-5   NR MBI2100297.1 2053638 g48434 i0 40.8 0.855421686746988 71 41 85.5 1 249 37 13 82 MBI2100297.1 hypothetical protein [Candidatus Vogelbacteria bacterium] diamond 213 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;