RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Tayloriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Tayloriibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29070330 29070330 PRJNA630162_P_NODE_129008_length_170_cov_1.371901_g127485_i0 PRJNA630162 129008 170 1.371901 2.3322317 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 49.7 2.07e-6   NR MDB5204740.1 2052153 g127485 i0 84.6 0.458823529411765 26 4 45.9 0 11 88 1 26 MDB5204740.1 hypothetical protein [Candidatus Taylorbacteria bacterium] diamond 78 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
30378126 30378126 PRJNA630162_P_NODE_112732_length_178_cov_1.813953_g111209_i0 PRJNA630162 112732 178 1.813953 3.22883634 Bacteria 2 Bacteria Bacteria 57.4 3.04e-8   NR OHA16301.1 1802299 g111209 i0 96.4 1.41573033707865 28 1 47.2 0 85 2 1 28 OHA16301.1 MAG: hypothetical protein A2830_00145 [Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_44_110] diamond 252 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_44_110
30693733 30693733 PRJNA630162_P_NODE_89353_length_192_cov_1.888112_g87830_i0 PRJNA630162 89353 192 1.888112 3.62517504 Bacteria 2 Bacteria Bacteria 110 3.3500000000000006e-27   NR MEI6396746.1 2052153 g87830 i0 80.6 4.8125 62 12 96.9 0 6 191 243 304 MEI6396746.1 PCRF domain-containing protein [Candidatus Taylorbacteria bacterium] diamond 924 110 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
31895075 31895075 PRJNA630162_P_NODE_69117_length_213_cov_2.530488_g67594_i0 PRJNA630162 69117 213 2.530488 5.38993944 Bacteria 2 Bacteria Bacteria 48.1 2.69e-5   NR MDB5259410.1 2052153 g67594 i0 66.7 5.16901408450704 33 11 46.5 0 101 3 26 58 MDB5259410.1 ribosomal protein [Candidatus Taylorbacteria bacterium] diamond 1101 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;