RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Roizmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31325696 31325696 PRJNA630162_P_NODE_123815_length_172_cov_2.349593_g122292_i0 PRJNA630162 123815 172 2.349593 4.04129996 Bacteria 2 Bacteria Bacteria 89.4 5.09e-19   NR PJE61121.1 1974851 g122292 i0 75.5 6.48837209302326 53 13 92.4 0 166 8 269 321 PJE61121.1 MAG: F0F1 ATP synthase subunit alpha [Candidatus Roizmanbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_26] diamond 1116 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_26
32496425 32496425 PRJNA630162_P_NODE_155959_length_163_cov_0.912281_g154436_i0 PRJNA630162 155959 163 0.912281 1.48701803 Bacteria 2 Bacteria Bacteria 53.9 5.38e-7   NR OGK52595.1 1802067 g154436 i0 75.8 2.42944785276074 33 8 60.7 0 103 5 2 34 OGK52595.1 MAG: hypothetical protein A2966_03580 [Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_41_22] diamond 396 54.3 0.992633517495396 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_41_22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;