RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Hadarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hadarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630162 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28217426 28217426 PRJNA630162_P_NODE_159446_length_162_cov_1.584071_g157923_i0 PRJNA630162 159446 162 1.584071 2.56619502 Candidatus Hadarchaeum sp. 2883567 Archaea Archaea 52.4 4.21e-6   NR MEM3453491.1 2883567 g157923 i0 50 0.740740740740741 40 20 74.1 0 122 3 25 64 MEM3453491.1 hypothetical protein [Candidatus Hadarchaeum sp.] diamond 120 52.4 1 Archaea   Methanobacteriati Candidatus Hadarchaeota Candidatus Hadarchaeia Candidatus Hadarchaeales Candidatus Hadarchaeaceae Candidatus Hadarchaeum Candidatus Hadarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;