RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29114545 29114545 PRJNA630162_P_NODE_152988_length_164_cov_0.904348_g151465_i0 PRJNA630162 152988 164 0.904348 1.48313072 root 1 Root_unresolved Root_unresolved 54.7 7.7300000000000005e-07   NR KNE57871.1 578462 g151465 i0 66.7 7.48170731707317 33 11 60.4 0 152 54 652 684 KNE57871.1 ribonucleoside-diphosphate reductase large subunit [Allomyces macrogynus ATCC 38327] diamond 1227 54.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
29638178 29638178 PRJNA630162_P_NODE_160230_length_162_cov_0.920354_g158707_i0 PRJNA630162 160230 162 0.920354 1.49097348 Catenaria anguillulae PL171 765915 Fungi Fungi 40 0.0282   NR ORZ40939.1 765915 g158707 i0 52.6 0.703703703703704 38 17 68.5 1 118 8 38 75 ORZ40939.1 hypothetical protein BCR44DRAFT_1424075 [Catenaria anguillulae PL171] diamond 114 40 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
30617714 30617714 PRJNA630162_P_NODE_154993_length_163_cov_1.587719_g153470_i0 PRJNA630162 154993 163 1.587719 2.58798197 Coelomomyces lativittatus 945690 Fungi Fungi 72 2.6e-13   NR KAJ1507952.1 945690 g153470 i0 57.7 2.7239263803681 52 22 95.7 0 158 3 189 240 KAJ1507952.1 hypothetical protein HMI54_003673 [Coelomomyces lativittatus] diamond 444 72 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
30978230 30978230 PRJNA630162_P_NODE_135314_length_168_cov_0.873950_g133791_i0 PRJNA630162 135314 168 0.87395 1.468236 Fungi 4751 Fungi Fungi 75.1 5.17e-14   NR KAI9168527.1 1313167 g133791 i0 64.2 8.48214285714286 53 15 94.6 1 161 3 63 111 KAI9168527.1 hypothetical protein H9P43_007900 [Blastocladiella emersonii ATCC 22665] diamond 1425 75.5 0.994701986754967 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
31091787 31091787 PRJNA630162_P_NODE_162815_length_161_cov_2.687500_g161292_i0 PRJNA630162 162815 161 2.6875 4.326875 Paraphysoderma sedebokerense 1500003 Fungi Fungi 62 1.94e-9   NR KAI9135928.1 1500003 g161292 i0 70 4.13664596273292 40 12 74.5 0 9 128 929 968 KAI9135928.1 SNF2 family N-terminal domain-containing protein [Paraphysoderma sedebokerense] diamond 666 62 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31819163 31819163 PRJNA630162_P_NODE_91997_length_190_cov_2.929078_g90474_i0 PRJNA630162 91997 190 2.929078 5.5652482 Blastocladiella britannica 64508 Fungi Fungi 65.1 1.84e-10   NR KAI9223416.1 64508 g90474 i0 58 3.94736842105263 50 21 78.9 0 11 160 220 269 KAI9223416.1 hypothetical protein BC828DRAFT_260769 [Blastocladiella britannica] diamond 750 65.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;