RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28028319 28028319 PRJNA630162_P_NODE_131705_length_169_cov_0.866667_g130182_i0 PRJNA630162 131705 169 0.866667 1.46466723 Halalkalibaculum roseum 2709311 Bacteria Bacteria 61.2 3.54e-10   NR WP_165143912.1 2709311 g130182 i0 51.9 2.84023668639053 54 26 95.9 0 163 2 34 87 WP_165143912.1 50S ribosomal protein L22 [Halalkalibaculum roseum] diamond 480 61.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Halalkalibaculum Halalkalibaculum roseum
28880666 28880666 PRJNA630162_P_NODE_156928_length_163_cov_0.912281_g155405_i0 PRJNA630162 156928 163 0.912281 1.48701803 Balneola sp. 2024824 Bacteria Bacteria 55.1 5.7e-7   NR MEQ9718451.1 2024824 g155405 i0 49 2.70552147239264 49 25 90.2 0 150 4 1910 1958 MEQ9718451.1 BspA family leucine-rich repeat surface protein [Balneola sp.] diamond 441 55.1 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
30143514 30143514 PRJNA630162_P_NODE_147752_length_165_cov_0.896552_g146229_i0 PRJNA630162 147752 165 0.896552 1.4793108 Balneolaceae bacterium 2053516 Bacteria Bacteria 58.2 4.63e-8   NR MDX1638980.1 2053516 g146229 i0 65.9 0.745454545454545 41 14 74.5 0 130 8 466 506 MDX1638980.1 lamin tail domain-containing protein [Balneolaceae bacterium] diamond 123 58.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;