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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9529799 9529799 PRJNA630162_P_NODE_100228_length_185_cov_2.698529_g98705_i0 PRJNA630162 100228 185 2.698529 4.99227865 Theileria 5873 SAR_Eukaryotes SAR_Eukaryotes 87.8 3.98e-20   NR XP_953890.1 5874 g98705 i0 76.9 8.3027027027027 52 12 84.3 0 6 161 38 89 XP_953890.1 eukaryotic translation initiation factor (eIF5A) [Theileria annulata] diamond 1536 87.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
12630277 12630277 PRJNA630162_P_NODE_137570_length_167_cov_2.584746_g136047_i0 PRJNA630162 137570 167 2.584746 4.31652582 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 75.5 3.56e-14   NR XP_011132156.1 110365 g136047 i0 69.2 1.88622754491018 52 16 93.4 0 159 4 181 232 XP_011132156.1 tubulin beta chain [Gregarina niphandrodes] diamond 315 75.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
18453615 18453615 PRJNA630162_P_NODE_132735_length_169_cov_0.866667_g131212_i0 PRJNA630162 132735 169 0.866667 1.46466723 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 95.5 2.0299999999999998e-24   NR XP_018641788.1 647221 g131212 i0 79.2 11.3254437869822 53 11 94.1 0 9 167 3 55 XP_018641788.1 alpha tubulin 1, partial [Plasmodium gaboni] diamond 1914 96.3 0.991692627206646 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
24828741 24828741 PRJNA630162_P_NODE_62060_length_224_cov_3.222857_g60537_i0 PRJNA630162 62060 224 3.222857 7.21919968 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 131 3.36e-35   NR ABU50373.1 5857 g60537 i0 82.2 13.6607142857143 73 13 97.8 0 6 224 140 212 ABU50373.1 glyceraldehyde-3-phosphate dehydrogenase, partial [Plasmodium fragile] diamond 3060 131 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
26859586 26859586 PRJNA630162_P_NODE_25421_length_362_cov_10.156550_g23901_i0 PRJNA630162 25421 362 10.15655 36.766711 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.0311   NR OEH73922.1 88456 g23901 i0 37.1 1.02762430939227 62 37 51.4 1 64 249 290 349 OEH73922.1 hypothetical protein cyc_03523 [Cyclospora cayetanensis] diamond 372 44.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
27586216 27586216 PRJNA630162_P_NODE_116364_length_176_cov_2.007874_g114841_i0 PRJNA630162 116364 176 2.007874 3.53385824 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0214   NR XP_003883803.1 572307 g114841 i0 47.1 0.579545454545455 34 18 58 0 159 58 638 671 XP_003883803.1 conserved hypothetical protein [Neospora caninum Liverpool] diamond 102 42.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27757048 27757048 PRJNA630162_P_NODE_155224_length_163_cov_1.473684_g153701_i0 PRJNA630162 155224 163 1.473684 2.40210492 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 86.7 2.71e-18   NR XP_012767589.1 5866 g153701 i0 76.5 107.815950920245 51 12 93.9 0 3 155 60 110 XP_012767589.1 ribosomal protein L3, putative [Babesia bigemina] diamond 17574 87.4 0.991990846681922 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
28185870 28185870 PRJNA630162_P_NODE_157006_length_163_cov_0.912281_g155483_i0 PRJNA630162 157006 163 0.912281 1.48701803 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 65.5 8.57e-12   NR VWU53187.1 2600580 g155483 i0 57.8 2.48466257668712 45 19 82.8 0 8 142 42 86 VWU53187.1 eukaryotic translation initiation factor 5A, putative, partial [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 405 65.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles
28514614 28514614 PRJNA630162_P_NODE_38947_length_285_cov_6.694915_g37424_i0 PRJNA630162 38947 285 6.694915 19.08050775 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 3.75e-7   NR EAA18798.1 73239 g37424 i0 43.8 3.17894736842105 73 39 74.7 1 41 253 21 93 EAA18798.1 hypothetical protein [Plasmodium yoelii yoelii] diamond 906 55.1 0.992740471869329 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
29606691 29606691 PRJNA630162_P_NODE_94230_length_189_cov_1.642857_g92707_i0 PRJNA630162 94230 189 1.642857 3.10499973 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0071   NR KAF8820472.1 476202 g92707 i0 60 0.476190476190476 30 12 47.6 0 96 185 642 671 KAF8820472.1 putative vacuolar sorting protein 35 [Cardiosporidium cionae] diamond 90 43.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
29808985 29808985 PRJNA630162_P_NODE_106891_length_181_cov_2.613636_g105368_i0 PRJNA630162 106891 181 2.613636 4.73068116 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 62 2.17e-9   NR XP_067804115.1 323732 g105368 i0 50 6.7292817679558 58 29 96.1 0 174 1 139 196 XP_067804115.1 bifunctional Ribosomal protein L10-like domain superfamily/50S ribosomal protein L10 [Babesia duncani] diamond 1218 62 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
30112299 30112299 PRJNA630162_P_NODE_62012_length_224_cov_4.040000_g60489_i0 PRJNA630162 62012 224 4.04 9.0496 Cryptosporidium felis 83540 SAR_Eukaryotes SAR_Eukaryotes 41.2 0.0424   NR KAF7457853.1 83540 g60489 i0 65.6 0.428571428571429 32 10 41.5 1 127 219 61 92 KAF7457853.1 Regulator of rDNA transcription protein 15 [Cryptosporidium felis] diamond 96 41.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
30315095 30315095 PRJNA630162_P_NODE_94672_length_189_cov_1.228571_g93149_i0 PRJNA630162 94672 189 1.228571 2.32199919 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 50.4 3.36e-5   NR BAN65106.1 5865 g93149 i0 73.3 1.42857142857143 30 8 47.6 0 98 187 54 83 BAN65106.1 phosphoglycerate kinase [Babesia bovis] diamond 270 50.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
30333831 30333831 PRJNA630162_P_NODE_110952_length_179_cov_1.784615_g109429_i0 PRJNA630162 110952 179 1.784615 3.19446085 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 46.6 1.43e-4   NR XP_013229778.1 5802 g109429 i0 58.5 1.37430167597765 41 17 68.7 0 175 53 60 100 XP_013229778.1 ribosomal protein L41, putative [Eimeria tenella] diamond 246 46.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
30491527 30491527 PRJNA630162_P_NODE_164833_length_159_cov_2.790909_g163310_i0 PRJNA630162 164833 159 2.790909 4.43754531 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 54.3 3.28e-7   NR XP_067925879.1 483139 g163310 i0 55.8 1.75471698113208 52 22 96.2 1 1 153 37 88 XP_067925879.1 60s acidic ribosomal protein [Cystoisospora suis] diamond 279 54.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
30725271 30725271 PRJNA630162_P_NODE_53494_length_241_cov_1.427083_g51971_i0 PRJNA630162 53494 241 1.427083 3.43927003 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99 4.63e-23   NR XP_029221901.1 94643 g51971 i0 59.7 5.80082987551867 77 31 95.9 0 237 7 19 95 XP_029221901.1 ribosomal protein RPL7A [Besnoitia besnoiti] diamond 1398 100 0.99 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
30744266 30744266 PRJNA630162_P_NODE_25754_length_360_cov_1.128617_g24234_i0 PRJNA630162 25754 360 1.128617 4.0630212 Cryptosporidium bovis 310047 SAR_Eukaryotes SAR_Eukaryotes 53.1 4.24e-6   NR XP_067184715.1 310047 g24234 i0 44.6 1.425 56 29 46.7 1 329 162 22 75 XP_067184715.1 cold shock RNA binding domain of the OB fold [Cryptosporidium bovis] diamond 513 53.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium bovis
30820156 30820156 PRJNA630162_P_NODE_155534_length_163_cov_1.359649_g154011_i0 PRJNA630162 155534 163 1.359649 2.21622787 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00143   NR KAF8821474.1 476202 g154011 i0 35.3 2.3558282208589 51 33 93.9 0 156 4 37 87 KAF8821474.1 hypothetical protein IE077_001992, partial [Cardiosporidium cionae] diamond 384 45.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
30838952 30838952 PRJNA630162_P_NODE_133714_length_168_cov_2.403361_g132191_i0 PRJNA630162 133714 168 2.403361 4.03764648 Cryptosporidium tyzzeri 756076 SAR_Eukaryotes SAR_Eukaryotes 89.7 2.36e-19   NR TRY53453.1 756076 g132191 i0 73.6 13.25 53 14 94.6 0 161 3 345 397 TRY53453.1 Eukaryotic initiation factor 4A [Cryptosporidium tyzzeri] diamond 2226 89.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium tyzzeri
30883235 30883235 PRJNA630162_P_NODE_60134_length_227_cov_6.314607_g58611_i0 PRJNA630162 60134 227 6.314607 14.33415789 root 1 Root_unresolved Root_unresolved 44.3 0.00291   NR KAF7457853.1 83540 g58611 i0 54.3 1.25550660792952 46 20 59.5 1 92 226 59 104 KAF7457853.1 Regulator of rDNA transcription protein 15 [Cryptosporidium felis] diamond 285 44.7 0.991051454138702 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
31502985 31502985 PRJNA630162_P_NODE_135216_length_168_cov_1.176471_g133693_i0 PRJNA630162 135216 168 1.176471 1.97647128 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 41.6 0.0297   NR XP_011132116.1 110365 g133693 i0 48.7 0.696428571428571 39 20 69.6 0 37 153 94 132 XP_011132116.1 ankyrin repeat protein [Gregarina niphandrodes] diamond 117 41.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
32072236 32072236 PRJNA630162_P_NODE_172718_length_151_cov_6.450980_g171195_i0 PRJNA630162 172718 151 6.45098 9.7409798 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 45.8 3.42e-4   NR XP_004832617.1 1537102 g171195 i0 60.5 0.754966887417219 38 15 75.5 0 32 145 87 124 XP_004832617.1 hypothetical protein BEWA_052190 [Theileria equi strain WA] diamond 114 45.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
32704212 32704212 PRJNA630162_P_NODE_159500_length_162_cov_1.548673_g157977_i0 PRJNA630162 159500 162 1.548673 2.50885026 Plasmodium fragile 5857 SAR_Eukaryotes SAR_Eukaryotes 46.6 5.25e-4   NR XP_012336558.1 5857 g157977 i0 65.7 5.55555555555556 35 12 64.8 0 154 50 280 314 XP_012336558.1 uncharacterized protein AK88_03522 [Plasmodium fragile] diamond 900 46.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;