RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA630162" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 1 ✖

bioproject 1

  • PRJNA630162 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_phylum 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27522935 27522935 PRJNA630162_P_NODE_104623_length_183_cov_1.276119_g103100_i0 PRJNA630162 104623 183 1.276119 2.33529777 Candidatus Asgardarchaeum californiense 3067292 Archaea Archaea 55.1 2.97e-8   NR RLI62949.1 3067292 g103100 i0 73.3 0.983606557377049 30 8 49.2 0 91 180 1 30 RLI62949.1 MAG: hypothetical protein DRO67_06530 [Candidatus Asgardarchaeum californiense] diamond 180 55.1 1 Archaea   Promethearchaeati   Candidatus Asgardarchaeia (ex Tamarit et al. 2024) Candidatus Asgardarchaeales (ex Tamarit et al. 2024) Candidatus Asgardarchaeaceae Candidatus Asgardarchaeum (ex Tamarit et al. 2024) Candidatus Asgardarchaeum californiense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;