RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_clade = "dsRNA viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • dsRNA viruses · 2 ✖

bioproject 1

  • PRJNA630162 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30365503 30365503 PRJNA630162_P_NODE_32792_length_314_cov_2.543396_g31270_i0 PRJNA630162 32792 314 2.543396 7.98626344 Corynespora cassiicola bipartite mycovirus 1 2762594 Viruses Viruses 51.2 8.85e-5   NR QNC69629.1 2762594 g31270 i0 36.3 2.60828025477707 91 51 86 4 41 310 218 302 QNC69629.1 putative RNA-dependent RNA polymerase [Corynespora cassiicola bipartite mycovirus 1] diamond 819 51.2 1 Viruses dsRNA viruses             Corynespora cassiicola bipartite mycovirus 1
31660827 31660827 PRJNA630162_P_NODE_26257_length_356_cov_2.488599_g24736_i0 PRJNA630162 26257 356 2.488599 8.85941244 Ustilaginoidea virens nonsegmented virus 2 2305465 Viruses Viruses 70.9 1.93e-11   NR YP_009553680.1 2305465 g24736 i0 41.2 2.88202247191011 114 66 96.1 1 15 356 24 136 YP_009553680.1 fusion protein [Ustilaginoidea virens nonsegmented virus 2] diamond 1026 70.9 1 Viruses dsRNA viruses             Ustilaginoidea virens nonsegmented virus 2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;