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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 10 ✖

bioproject 1

  • PRJNA630162 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1877890 1877890 PRJNA630162_P_NODE_147102_length_165_cov_1.387931_g145579_i0 PRJNA630162 147102 165 1.387931 2.29008615 Deltaproteobacteria bacterium RIFCSPHIGHO2_ 2026735 Bacteria Bacteria 94.7 9.3e-22   NR OGQ04046.1 1797856 g145579 i0 81.5 2.92727272727273 54 10 98.2 0 1 162 135 188 OGQ04046.1 MAG: protoheme IX farnesyltransferase [Deltaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_43_49] diamond 483 94.7 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_43_49
27428715 27428715 PRJNA630162_P_NODE_87603_length_193_cov_4.298611_g86080_i0 PRJNA630162 87603 193 4.298611 8.29631923 Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_44_9 1973965 Bacteria Bacteria 80.5 4.97e-18   NR PJB41914.1 1973965 g86080 i0 75.5 2.44041450777202 53 12 80.8 1 37 192 20 72 PJB41914.1 MAG: hypothetical protein CO106_06590, partial [Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_44_9] diamond 471 80.5 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_44_9
27757042 27757042 PRJNA630162_P_NODE_132004_length_169_cov_0.866667_g130481_i0 PRJNA630162 132004 169 0.866667 1.46466723 Thermodesulfobacteriota 200940 Bacteria Bacteria 62 2.23e-9   NR PKN36610.1 2013747 g130481 i0 67.5 2.1301775147929 40 13 71 0 166 47 2426 2465 PKN36610.1 MAG: hypothetical protein CVU62_13915 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-2] diamond 360 62 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium HGW-Deltaproteobacteria-2
28154702 28154702 PRJNA630162_P_NODE_122505_length_173_cov_1.604839_g120982_i0 PRJNA630162 122505 173 1.604839 2.77637147 SAR324 cluster bacterium 2024889 Bacteria Bacteria 47.8 2.38e-4   NR NMC62837.1 2024889 g120982 i0 46.8 0.815028901734104 47 25 81.5 0 171 31 108 154 NMC62837.1 hypothetical protein [SAR324 cluster bacterium] diamond 141 47.8 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
28217342 28217342 PRJNA630162_P_NODE_105686_length_182_cov_1.736842_g104163_i0 PRJNA630162 105686 182 1.736842 3.16105244 Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 1797895 Bacteria Bacteria 45.1 0.00255   NR OGQ90120.1 1797895 g104163 i0 43.9 0.675824175824176 41 23 67.6 0 1 123 52 92 OGQ90120.1 MAG: hypothetical protein A2289_03855 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] diamond 123 45.1 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15
29543763 29543763 PRJNA630162_P_NODE_60490_length_227_cov_1.556180_g58967_i0 PRJNA630162 60490 227 1.55618 3.5325286 SAR324 cluster bacterium 2024889 Bacteria Bacteria 56.2 3.26e-7   NR NMC62025.1 2024889 g58967 i0 67.6 1.28193832599119 34 11 44.9 0 217 116 93 126 NMC62025.1 hypothetical protein [SAR324 cluster bacterium] diamond 291 56.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
29764567 29764567 PRJNA630162_P_NODE_112251_length_178_cov_2.635659_g110728_i0 PRJNA630162 112251 178 2.635659 4.69147302 SAR324 cluster bacterium 2024889 Bacteria Bacteria 42 0.0283   NR MEC7217655.1 2024889 g110728 i0 32.8 0.97752808988764 58 39 97.8 0 176 3 251 308 MEC7217655.1 glycosyltransferase family 1 protein [SAR324 cluster bacterium] diamond 174 42 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
30933994 30933994 PRJNA630162_P_NODE_98674_length_186_cov_2.364964_g97151_i0 PRJNA630162 98674 186 2.364964 4.39883304 uncultured delta proteobacterium HF 34034 Bacteria Bacteria 46.6 4.1e-4   NR ADI19064.1 710825 g97151 i0 43.3 0.967741935483871 60 31 96.8 1 1 180 93 149 ADI19064.1 hypothetical protein [uncultured delta proteobacterium HF0070_15B21] diamond 180 46.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0070_15B21
31629337 31629337 PRJNA630162_P_NODE_145276_length_165_cov_4.146552_g143753_i0 PRJNA630162 145276 165 4.146552 6.8418108 uncultured delta proteobacterium HF4 34034 Bacteria Bacteria 45.1 5.23e-4   NR ADI18411.1 710836 g143753 i0 62.5 0.727272727272727 40 10 63.6 1 6 110 27 66 ADI18411.1 hypothetical protein [uncultured delta proteobacterium HF4000_08N17] diamond 120 45.1 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF4000_08N17
32685432 32685432 PRJNA630162_P_NODE_88300_length_193_cov_1.756944_g86777_i0 PRJNA630162 88300 193 1.756944 3.39090192 Bacteria 2 Bacteria Bacteria 45.4 0.00132   NR ADI17622.1 710828 g86777 i0 67.6 1.9740932642487 34 11 52.8 0 190 89 86 119 ADI17622.1 hypothetical protein [uncultured delta proteobacterium HF0130_19C20] diamond 381 45.8 0.991266375545852 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0130_19C20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;