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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA630162" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 18 ✖

bioproject 1

  • PRJNA630162 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23553991 23553991 PRJNA630162_P_NODE_110979_length_179_cov_1.730769_g109456_i0 PRJNA630162 110979 179 1.730769 3.09807651 Methanobacteriaceae archaeon 2099680 Archaea Archaea 112 7.160000000000001e-29   NR MDP3036012.1 2099680 g109456 i0 98.3 1.97765363128492 59 1 98.9 0 2 178 122 180 MDP3036012.1 methyl-coenzyme M reductase subunit beta [Methanobacteriaceae archaeon] diamond 354 112 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
24828509 24828509 PRJNA630162_P_NODE_40120_length_281_cov_1.021552_g38597_i0 PRJNA630162 40120 281 1.021552 2.87056112 Methanobacteriaceae archaeon 2099680 Archaea Archaea 103 6.63e-24   NR HSO25705.1 2099680 g38597 i0 53.2 1.00355871886121 94 43 99.3 1 281 3 79 172 HSO25705.1 hypothetical protein [Methanobacteriaceae archaeon] diamond 282 103 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
26859691 26859691 PRJNA630162_P_NODE_90961_length_191_cov_1.767606_g89438_i0 PRJNA630162 90961 191 1.767606 3.37612746 Methanobrevibacter sp. 66852 Archaea Archaea 44.7 0.004   NR MBR5503518.1 66852 g89438 i0 45.5 0.691099476439791 44 22 69.1 1 11 142 50 91 MBR5503518.1 hypothetical protein [Methanobrevibacter sp.] diamond 132 44.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
26985704 26985704 PRJNA630162_P_NODE_161822_length_162_cov_0.920354_g160299_i0 PRJNA630162 161822 162 0.920354 1.49097348 Methanobrevibacter sp. 66852 Archaea Archaea 49.7 4.36e-5   NR WP_407454888.1 66852 g160299 i0 56.3 0.888888888888889 48 20 88.9 1 149 6 130 176 WP_407454888.1 right-handed parallel beta-helix repeat-containing protein [Methanobrevibacter sp.] diamond 144 49.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27807439 27807439 PRJNA630162_P_NODE_140324_length_167_cov_0.881356_g138801_i0 PRJNA630162 140324 167 0.881356 1.47186452 Methanobrevibacter sp. 66852 Archaea Archaea 58.2 4.8e-8   NR MBR5504340.1 66852 g138801 i0 54.9 0.916167664670659 51 19 91.6 1 1 153 437 483 MBR5504340.1 AAA family ATPase [Methanobrevibacter sp.] diamond 153 58.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27883031 27883031 PRJNA630162_P_NODE_152025_length_164_cov_0.904348_g150502_i0 PRJNA630162 152025 164 0.904348 1.48313072 Methanobrevibacter 2172 Archaea Archaea 104 2.7e-27   NR WP_405310204.1 66852 g150502 i0 98.1 7.60975609756098 52 1 95.1 0 156 1 12 63 WP_405310204.1 winged helix-turn-helix transcriptional regulator [Methanobrevibacter sp.] diamond 1248 104 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29448811 29448811 PRJNA630162_P_NODE_161790_length_162_cov_0.920354_g160267_i0 PRJNA630162 161790 162 0.920354 1.49097348 Methanobacteriaceae archaeon 2099680 Archaea Archaea 68.9 6.58e-12   NR MBX7076500.1 2099680 g160267 i0 56.9 0.944444444444444 51 22 94.4 0 155 3 336 386 MBX7076500.1 elongation factor Tu [Methanobacteriaceae archaeon] diamond 153 68.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
30333864 30333864 PRJNA630162_P_NODE_132272_length_169_cov_0.866667_g130749_i0 PRJNA630162 132272 169 0.866667 1.46466723 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 97.8 9.86e-23   NR WP_296891192.1 253161 g130749 i0 96.4 2.92899408284024 55 2 97.6 0 169 5 245 299 WP_296891192.1 Ig-like domain-containing protein, partial [uncultured Methanobrevibacter sp.] diamond 495 97.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30491519 30491519 PRJNA630162_P_NODE_156473_length_163_cov_0.912281_g154950_i0 PRJNA630162 156473 163 0.912281 1.48701803 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 100 4.7399999999999997e-23   NR WP_296852426.1 253161 g154950 i0 98.1 1.91411042944785 52 1 95.7 0 158 3 37 88 WP_296852426.1 helicase HerA-like domain-containing protein [uncultured Methanobrevibacter sp.] diamond 312 100 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30807348 30807348 PRJNA630162_P_NODE_103934_length_183_cov_1.910448_g102411_i0 PRJNA630162 103934 183 1.910448 3.49611984 Methanobrevibacter sp. UBA188 1915473 Archaea Archaea 129 5.18e-33   NR WP_292881706.1 1915473 g102411 i0 100 0.967213114754098 59 0 96.7 0 2 178 525 583 WP_292881706.1 PP2C family protein-serine/threonine phosphatase [Methanobrevibacter sp. UBA188] diamond 177 129 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. UBA188
31755965 31755965 PRJNA630162_P_NODE_85337_length_196_cov_0.993197_g83814_i0 PRJNA630162 85337 196 0.993197 1.94666612 Methanocaldococcus lauensis 2546128 Archaea Archaea 63.5 4.47e-10   NR CAB3287519.1 2546128 g83814 i0 55 0.918367346938776 60 23 85.7 1 175 8 112 171 CAB3287519.1 protein of unknown function [Methanocaldococcus lauensis] diamond 180 63.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus lauensis
32294202 32294202 PRJNA630162_P_NODE_82139_length_199_cov_1.646667_g80616_i0 PRJNA630162 82139 199 1.646667 3.27686733 Methanobrevibacter sp. 66852 Archaea Archaea 70.9 9.49e-14   NR MBO7211560.1 66852 g80616 i0 50.8 0.979899497487437 65 30 96.5 2 6 197 22 85 MBO7211560.1 hypothetical protein [Methanobrevibacter sp.] diamond 195 70.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32452136 32452136 PRJNA630162_P_NODE_132539_length_169_cov_0.866667_g131016_i0 PRJNA630162 132539 169 0.866667 1.46466723 Methanobrevibacter sp. 66852 Archaea Archaea 94 1.26e-20   NR WP_405309801.1 66852 g131016 i0 80.4 2.98224852071006 56 9 99.4 1 1 168 1428 1481 WP_405309801.1 beta strand repeat-containing protein, partial [Methanobrevibacter sp.] diamond 504 94 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32452159 32452159 PRJNA630162_P_NODE_149019_length_165_cov_0.896552_g147496_i0 PRJNA630162 149019 165 0.896552 1.4793108 Methanobrevibacter sp. 66852 Archaea Archaea 107 3.7e-28   NR WP_292783638.1 66852 g147496 i0 94.3 4.81818181818182 53 3 96.4 0 163 5 67 119 WP_292783638.1 nuclease [Methanobrevibacter sp.] diamond 795 107 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32483605 32483605 PRJNA630162_P_NODE_113479_length_178_cov_1.255814_g111956_i0 PRJNA630162 113479 178 1.255814 2.23534892 Methanobrevibacter millerae 230361 Archaea Archaea 115 2.76e-28   NR WP_149731223.1 230361 g111956 i0 96.5 0.960674157303371 57 2 96.1 0 173 3 299 355 WP_149731223.1 type I restriction-modification system subunit M [Methanobrevibacter millerae] diamond 171 115 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae
32672676 32672676 PRJNA630162_P_NODE_114500_length_177_cov_2.015625_g112977_i0 PRJNA630162 114500 177 2.015625 3.56765625 Methanobrevibacter sp. 66852 Archaea Archaea 109 5.08e-28   NR WP_405273466.1 66852 g112977 i0 96.3 1.83050847457627 54 2 91.5 0 164 3 108 161 WP_405273466.1 4Fe-4S double cluster binding domain-containing protein [Methanobrevibacter sp.] diamond 324 109 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32704200 32704200 PRJNA630162_P_NODE_152840_length_164_cov_0.904348_g151317_i0 PRJNA630162 152840 164 0.904348 1.48313072 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 94.4 1.08e-21   NR WP_298501138.1 253161 g151317 i0 98.1 0.969512195121951 53 1 97 0 5 163 1 53 WP_298501138.1 hypothetical protein [uncultured Methanobrevibacter sp.] diamond 159 94.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
32893079 32893079 PRJNA630162_P_NODE_111200_length_179_cov_1.530769_g109677_i0 PRJNA630162 111200 179 1.530769 2.74007651 Methanobrevibacter sp. 66852 Archaea Archaea 90.5 2.24e-19   NR MBO7695876.1 66852 g109677 i0 66.1 1.9608938547486 59 20 98.9 0 1 177 386 444 MBO7695876.1 hypothetical protein [Methanobrevibacter sp.] diamond 351 90.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;