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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA627467" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 22 ✖

bioproject 1

  • PRJNA627467 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10803285 10803285 PRJNA627467_P_NODE_12369_length_179_cov_6.615385_g12300_i0 PRJNA627467 12369 179 6.615385 11.84153915 Candidatus Nanosynsacchari 2789662 Bacteria Bacteria 115 1.98e-29   NR WP_129693373.1 1986206 g12300 i0 94.8 6.80446927374302 58 3 97.2 0 1 174 184 241 WP_129693373.1 UDP-glucose 4-epimerase GalE [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] diamond 1218 116 0.991379310344828 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Nanosynsacchari Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1
22276354 22276354 PRJNA627467_P_NODE_4238_length_316_cov_1.794007_g4170_i0 PRJNA627467 4238 316 1.794007 5.66906212 Candidatus Saccharimonas 1331051 Bacteria Bacteria 70.1 1.76e-11   NR RKW04394.1 1917697 g4170 i0 100 0.626582278481013 33 0 31.3 0 315 217 250 282 RKW04394.1 MAG: glycosyltransferase family 4 protein, partial [Candidatus Saccharimonas sp.] diamond 198 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
26637358 26637358 PRJNA627467_P_NODE_12381_length_179_cov_5.184615_g12312_i0 PRJNA627467 12381 179 5.184615 9.28046085 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 121 4.08e-34   NR RKW00892.1 1917697 g12312 i0 96.5 1.89385474860335 57 2 95.5 0 173 3 45 101 RKW00892.1 MAG: hypothetical protein D8B38_05110, partial [Candidatus Saccharimonas sp.] diamond 339 121 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
26922421 26922421 PRJNA627467_P_NODE_11322_length_183_cov_2.179104_g11253_i0 PRJNA627467 11322 183 2.179104 3.98776032 Patescibacteria group bacterium 2052139 Bacteria Bacteria 105 2.9500000000000003e-27   NR HUW48641.1 2052139 g11253 i0 74.6 0.967213114754098 59 15 96.7 0 7 183 22 80 HUW48641.1 hypothetical protein [Patescibacteria group bacterium] diamond 177 105 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27396826 27396826 PRJNA627467_P_NODE_16563_length_166_cov_3.282051_g16494_i0 PRJNA627467 16563 166 3.282051 5.44820466 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 108 2.7e-26   NR MBB1567060.1 2026720 g16494 i0 100 0.975903614457831 54 0 97.6 0 5 166 23 76 MBB1567060.1 arginine deiminase [Candidatus Saccharibacteria bacterium] diamond 162 108 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27820083 27820083 PRJNA627467_P_NODE_13204_length_177_cov_1.429688_g13135_i0 PRJNA627467 13204 177 1.429688 2.53054776 Candidatus Saccharimonadia 2093818 Bacteria Bacteria 111 1.6e-28   NR RKW04014.1 1917697 g13135 i0 96.5 1.93220338983051 57 2 96.6 0 5 175 113 169 RKW04014.1 MAG: glutamate--tRNA ligase, partial [Candidatus Saccharimonas sp.] diamond 342 111 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
27996703 27996703 PRJNA627467_P_NODE_3725_length_316_cov_1.951311_g3657_i0 PRJNA627467 3725 316 1.951311 6.16614276 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 114 9.62e-30   NR MBB1567514.1 2026720 g3657 i0 59.6 0.987341772151899 104 12 98.7 1 2 313 86 159 MBB1567514.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 312 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28122892 28122892 PRJNA627467_P_NODE_17045_length_165_cov_3.594828_g16976_i0 PRJNA627467 17045 165 3.594828 5.9314662 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 78.6 2.98e-15   NR MBN9397727.1 2026720 g16976 i0 75.5 0.963636363636364 53 13 96.4 0 161 3 457 509 MBN9397727.1 ATP-dependent Clp protease ATP-binding subunit [Candidatus Saccharibacteria bacterium] diamond 159 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28501839 28501839 PRJNA627467_P_NODE_3647_length_316_cov_1.981273_g3579_i0 PRJNA627467 3647 316 1.981273 6.26082268 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 109 4.82e-26   NR MBB1567730.1 2026720 g3579 i0 60 0.996835443037975 105 8 99.7 1 1 315 149 219 MBB1567730.1 glycosyltransferase [Candidatus Saccharibacteria bacterium] diamond 315 109 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28501842 28501842 PRJNA627467_P_NODE_6767_length_266_cov_2.709677_g6698_i0 PRJNA627467 6767 266 2.709677 7.20774082 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 124 1.4399999999999998e-30   NR MFA6184522.1 2053613 g6698 i0 68.2 0.992481203007519 88 28 99.2 0 264 1 815 902 MFA6184522.1 tail fiber domain-containing protein [Candidatus Shapirobacteria bacterium] diamond 264 124 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
28817200 28817200 PRJNA627467_P_NODE_16528_length_166_cov_4.350427_g16459_i0 PRJNA627467 16528 166 4.350427 7.22170882 Patescibacteria group bacterium 2052139 Bacteria Bacteria 92.8 3.05e-20   NR MSU76406.1 2052139 g16459 i0 73.6 0.957831325301205 53 14 95.8 0 163 5 492 544 MSU76406.1 ribonuclease J [Patescibacteria group bacterium] diamond 159 92.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29354407 29354407 PRJNA627467_P_NODE_5949_length_315_cov_2.266917_g5881_i0 PRJNA627467 5949 315 2.266917 7.14078855 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 64.7 1.64e-9   NR MFQ5852030.1 2838779 g5881 i0 90.6 0.304761904761905 32 3 30.5 0 97 2 162 193 MFQ5852030.1 type I-C CRISPR-associated protein Cas8c/Csd1 [Candidatus Binatia bacterium] diamond 96 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29954262 29954262 PRJNA627467_P_NODE_13271_length_176_cov_4.590551_g13202_i0 PRJNA627467 13271 176 4.590551 8.07936976 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 122 1.56e-33   NR MBB1567684.1 2026720 g13202 i0 100 0.971590909090909 57 0 97.2 0 3 173 50 106 MBB1567684.1 queuine tRNA-ribosyltransferase family protein [Candidatus Saccharibacteria bacterium] diamond 171 122 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30491396 30491396 PRJNA627467_P_NODE_13893_length_174_cov_3.688000_g13824_i0 PRJNA627467 13893 174 3.688 6.41712 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 44.7 0.00306   NR HUC95541.1 2890869 g13824 i0 60.6 0.568965517241379 33 13 56.9 0 104 6 390 422 HUC95541.1 DUF2206 domain-containing protein [Candidatus Saccharimonadia bacterium] diamond 99 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
31122873 31122873 PRJNA627467_P_NODE_20475_length_156_cov_3.168224_g20406_i0 PRJNA627467 20475 156 3.168224 4.94242944 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 94.7 1.8000000000000001e-22   NR MBB1557924.1 2026720 g20406 i0 96.1 0.980769230769231 51 2 98.1 0 154 2 60 110 MBB1557924.1 30S ribosomal protein S3 [Candidatus Saccharibacteria bacterium] diamond 153 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31186169 31186169 PRJNA627467_P_NODE_17615_length_164_cov_2.582609_g17546_i0 PRJNA627467 17615 164 2.582609 4.23547876 Candidatus Saccharibacteria bacterium 49-2 1895829 Bacteria Bacteria 41.2 0.0438   NR OJU88105.1 1895829 g17546 i0 61.1 0.658536585365854 36 14 65.9 0 2 109 224 259 OJU88105.1 MAG: hypothetical protein BGO17_03985 [Candidatus Saccharibacteria bacterium 49-20] diamond 108 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
31217631 31217631 PRJNA627467_P_NODE_10875_length_184_cov_6.585185_g10806_i0 PRJNA627467 10875 184 6.585185 12.1167404 Candidatus Nanosynbacter sp. 2725945 Bacteria Bacteria 130 9.329999999999999e-34   NR MBF1032634.1 2725945 g10806 i0 100 0.978260869565217 60 0 97.8 0 5 184 492 551 MBF1032634.1 aspartate--tRNA ligase [Candidatus Nanosynbacter sp.] diamond 180 130 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp.
31439360 31439360 PRJNA627467_P_NODE_17616_length_164_cov_2.573913_g17547_i0 PRJNA627467 17616 164 2.573913 4.22121732 Candidatus Nanosynbacter sp. 2725945 Bacteria Bacteria 111 6.79e-27   NR MBF1033033.1 2725945 g17547 i0 100 0.969512195121951 53 0 97 0 3 161 169 221 MBF1033033.1 CTP synthase [Candidatus Nanosynbacter sp.] diamond 159 111 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp.
31452419 31452419 PRJNA627467_P_NODE_16816_length_166_cov_1.324786_g16747_i0 PRJNA627467 16816 166 1.324786 2.19914476 Pseudomonadati 3379134 Bacteria Bacteria 105 2.33e-25   NR HEY7318535.1 2838779 g16747 i0 85.2 2.94578313253012 54 8 97.6 0 5 166 75 128 HEY7318535.1 DUF4105 domain-containing protein [Candidatus Binatia bacterium] diamond 489 105 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32008881 32008881 PRJNA627467_P_NODE_4298_length_316_cov_1.779026_g4230_i0 PRJNA627467 4298 316 1.779026 5.62172216 TM7 phylum sp. oral taxon 346 713049 Bacteria Bacteria 65.1 1.22e-9   NR TWP22153.1 713049 g4230 i0 96.9 0.30379746835443 32 1 30.4 0 218 313 130 161 TWP22153.1 hypothetical protein EUA61_00190 [TM7 phylum sp. oral taxon 346] diamond 96 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 346
32735931 32735931 PRJNA627467_P_NODE_4680_length_316_cov_1.696629_g4612_i0 PRJNA627467 4680 316 1.696629 5.36134764 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 45.1 0.0131   NR MBX7245460.1 2315423 g4612 i0 65.6 0.30379746835443 32 11 30.4 0 217 312 158 189 MBX7245460.1 O-antigen ligase family protein [Candidatus Sumerlaeaceae bacterium] diamond 96 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium
32798533 32798533 PRJNA627467_P_NODE_2180_length_316_cov_2.981273_g2112_i0 PRJNA627467 2180 316 2.981273 9.42082268 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 67 2.83e-10   NR MFA6184522.1 2053613 g2112 i0 81.8 0.313291139240506 33 6 31.3 0 100 2 788 820 MFA6184522.1 tail fiber domain-containing protein [Candidatus Shapirobacteria bacterium] diamond 99 67 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;