RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA624323" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA624323 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27333599 27333599 PRJNA624323_P_NODE_1623_length_579_cov_1.308300_g1464_i0 PRJNA624323 1623 579 1.3083 7.575057 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 52.4 3.97e-4   NR XCO56027.1 3233859 g1464 i0 21.3 0.974093264248705 188 142 95.9 4 565 11 195 379 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 564 52.4 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1
27630633 27630633 PRJNA624323_P_NODE_9724_length_235_cov_2.203704_g9562_i0 PRJNA624323 9724 235 2.203704 5.1787044 Viruses 10239 Viruses Viruses 43.1 0.024   NR URG16822.1 2809572 g9562 i0 37 2.96170212765957 54 34 68.9 0 228 67 306 359 URG16822.1 MAG: RNA dependent RNA polymerase, partial [Mitoviridae sp.] diamond 696 43.1 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.
29701169 29701169 PRJNA624323_P_NODE_3590_length_388_cov_2.190476_g3429_i0 PRJNA624323 3590 388 2.190476 8.49904688 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 65.5 2.17e-9   NR XCO56027.1 3233859 g3429 i0 35.1 0.858247422680412 111 72 85.8 0 4 336 571 681 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 333 65.5 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;