RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA624323" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA624323 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27554237 27554237 PRJNA624323_P_NODE_8124_length_250_cov_0.870056_g7962_i0 PRJNA624323 8124 250 0.870056 2.17514 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 151 2.2e-40   NR MBX9770849.1 2364082 g7962 i0 91.6 0.996 83 7 99.6 0 1 249 605 687 MBX9770849.1 CusA/CzcA family heavy metal efflux RND transporter [Candidatus Obscuribacterales bacterium] diamond 249 151 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29007247 29007247 PRJNA624323_P_NODE_9488_length_241_cov_0.916667_g9326_i0 PRJNA624323 9488 241 0.916667 2.20916747 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 103 1.06e-25   NR MBL8086383.1 2711154 g9326 i0 81.5 0.809128630705394 65 8 75.9 1 186 4 58 122 MBL8086383.1 ankyrin repeat domain-containing protein [Candidatus Obscuribacter sp.] diamond 195 103 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;