RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA624323" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA624323 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28122850 28122850 PRJNA624323_P_NODE_6785_length_274_cov_1.402985_g6623_i0 PRJNA624323 6785 274 1.402985 3.8441789 Acidobacteriota bacterium 1978231 Bacteria Bacteria 92 6.170000000000001e-21   NR MEP7039316.1 1978231 g6623 i0 62.1 2.60583941605839 87 33 95.3 0 274 14 79 165 MEP7039316.1 Spy/CpxP family protein refolding chaperone [Acidobacteriota bacterium] diamond 714 92 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31028604 31028604 PRJNA624323_P_NODE_9475_length_241_cov_0.916667_g9313_i0 PRJNA624323 9475 241 0.916667 2.20916747 Acidobacteria bacterium OLB17 1617423 Bacteria Bacteria 75.1 9.42e-16   NR KXJ97965.1 1617423 g9313 i0 55.4 0.809128630705394 65 28 79.7 1 48 239 1 65 KXJ97965.1 MAG: hypothetical protein UZ17_ACD001002855 [Acidobacteria bacterium OLB17] diamond 195 75.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium OLB17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;