RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA624323" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 6 ✖

bioproject 1

  • PRJNA624323 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13350565 13350565 PRJNA624323_P_NODE_8431_length_248_cov_0.880000_g8269_i0 PRJNA624323 8431 248 0.88 2.1824 Nostocales 1161 Bacteria Bacteria 151 3.0399999999999993e-43   NR WP_029633529.1 1161 g8269 i0 92.3 0.943548387096774 78 6 94.4 0 235 2 1 78 WP_029633529.1 MULTISPECIES: UbiA-like protein EboC [Nostocales] diamond 234 151 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales      
26827530 26827530 PRJNA624323_P_NODE_8081_length_250_cov_0.870056_g7919_i0 PRJNA624323 8081 250 0.870056 2.17514 Gloeocapsa sp. PCC 7428 1173026 Bacteria Bacteria 131 7.08e-36   NR WP_015187016.1 1173026 g7919 i0 89.2 0.996 83 9 99.6 0 249 1 88 170 WP_015187016.1 MHYT domain-containing protein [Gloeocapsa sp. PCC 7428] diamond 249 131 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Chroococcaceae Gloeocapsa Gloeocapsa sp. PCC 7428
27554237 27554237 PRJNA624323_P_NODE_8124_length_250_cov_0.870056_g7962_i0 PRJNA624323 8124 250 0.870056 2.17514 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 151 2.2e-40   NR MBX9770849.1 2364082 g7962 i0 91.6 0.996 83 7 99.6 0 1 249 605 687 MBX9770849.1 CusA/CzcA family heavy metal efflux RND transporter [Candidatus Obscuribacterales bacterium] diamond 249 151 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28546370 28546370 PRJNA624323_P_NODE_8387_length_248_cov_0.880000_g8225_i0 PRJNA624323 8387 248 0.88 2.1824 Cyanophyceae 3028117 Bacteria Bacteria 44.3 0.0109   NR HEY9673052.1 3069706 g8225 i0 50 1.06451612903226 44 22 53.2 0 239 108 115 158 HEY9673052.1 transporter substrate-binding domain-containing protein [Waterburya sp.] diamond 264 44.7 0.991051454138702 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Pleurocapsales Hyellaceae Waterburya Waterburya sp.
28848836 28848836 PRJNA624323_P_NODE_8848_length_245_cov_1.395349_g8686_i0 PRJNA624323 8848 245 1.395349 3.41860505 Spirirestis rafaelensis 293980 Bacteria Bacteria 122 2.08e-34   NR MBW4446698.1 2835094 g8686 i0 91 0.820408163265306 67 6 82 0 242 42 1 67 MBW4446698.1 heavy-metal-associated domain-containing protein [Spirirestis rafaelensis WJT71-NPBG6] diamond 201 122 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Tolypothrichaceae Spirirestis Spirirestis rafaelensis
29007247 29007247 PRJNA624323_P_NODE_9488_length_241_cov_0.916667_g9326_i0 PRJNA624323 9488 241 0.916667 2.20916747 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 103 1.06e-25   NR MBL8086383.1 2711154 g9326 i0 81.5 0.809128630705394 65 8 75.9 1 186 4 58 122 MBL8086383.1 ankyrin repeat domain-containing protein [Candidatus Obscuribacter sp.] diamond 195 103 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;