RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA615351" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA615351 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31471127 31471127 PRJNA615351_P_NODE_42296_length_857_cov_2.409976_g31544_i0 PRJNA615351 42296 857 2.409976 20.65349432 Candidatus Aquilonibacter sp. 2952903 Bacteria Bacteria 102 1.18e-22   NR HET9028546.1 2952903 g31544 i0 37 0.644107351225204 184 90 64.4 3 78 629 4 161 HET9028546.1 GNAT family protein [Candidatus Aquilonibacter sp.] diamond 552 102 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Aquilonibacter Candidatus Aquilonibacter sp.
32640857 32640857 PRJNA615351_P_NODE_174700_length_161_cov_1.071429_g160600_i0 PRJNA615351 174700 161 1.071429 1.72500069 Candidatus Lustribacter sp. 3069335 Bacteria Bacteria 41.6 0.0312   NR HEY5350586.1 3069335 g160600 i0 38.8 0.91304347826087 49 30 91.3 0 160 14 102 150 HEY5350586.1 alpha/beta fold hydrolase [Candidatus Lustribacter sp.] diamond 147 41.6 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Lustribacter Candidatus Lustribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;