RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA615351" and tax_phylum = "Thermoplasmatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA615351 · 19 ✖

analysis 1

  • diamond · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17173384 17173384 PRJNA615351_P_NODE_13214_length_1803_cov_17.155543_g9492_i0 PRJNA615351 13214 1803 17.155543 309.31444029 root 1 Root_unresolved Root_unresolved 362 8.639999999999998e-116   NR MDA7464093.1 1915863 g9492 i0 40.1 3.86688851913478 461 268 76.7 4 1778 396 1 453 MDA7464093.1 DNA photolyase family protein [Candidatus Poseidonia alphae] diamond 6972 362 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae
26731778 26731778 PRJNA615351_P_NODE_107961_length_287_cov_1.757937_g93862_i0 PRJNA615351 107961 287 1.757937 5.04527919 Thermoplasmata archaeon 1906666 Archaea Archaea 44.3 0.0181   NR RLF51597.1 1906666 g93862 i0 36.5 0.543554006968641 52 32 53.3 1 193 41 214 265 RLF51597.1 MAG: hypothetical protein DRN19_02510, partial [Thermoplasmata archaeon] diamond 156 44.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
26890938 26890938 PRJNA615351_P_NODE_78481_length_435_cov_4.797500_g64456_i0 PRJNA615351 78481 435 4.7975 20.869125 Thermoplasmatota archaeon 2806419 Archaea Archaea 86.3 2.92e-18   NR MBN1539331.1 2806419 g64456 i0 37.6 3.98620689655172 125 73 85.5 4 429 58 26 146 MBN1539331.1 GNAT family N-acetyltransferase [Thermoplasmatota archaeon] diamond 1734 86.3 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
27428340 27428340 PRJNA615351_P_NODE_39903_length_902_cov_4.453287_g29623_i0 PRJNA615351 39903 902 4.453287 40.16864874 Methanomethylophilus alvi 1291540 Archaea Archaea 118 9.22e-26   NR WP_400225339.1 1291540 g29623 i0 29.1 0.947893569844789 285 153 82.5 12 847 104 13 285 WP_400225339.1 zinc-ribbon domain-containing protein [Methanomethylophilus alvi] diamond 855 118 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae Methanomethylophilus Methanomethylophilus alvi
28154394 28154394 PRJNA615351_P_NODE_121605_length_246_cov_1.696682_g107505_i0 PRJNA615351 121605 246 1.696682 4.17383772 Candidatus Aciduliprofundum boonei 379547 Archaea Archaea 45.8 0.00178   NR WP_008083872.1 379547 g107505 i0 34.3 0.853658536585366 70 43 85.4 1 215 6 33 99 WP_008083872.1 RNA 2',3'-cyclic phosphodiesterase [Candidatus Aciduliprofundum boonei] diamond 210 45.8 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Candidatus Aciduliprofundum boonei
28312163 28312163 PRJNA615351_P_NODE_153426_length_185_cov_1.600000_g139326_i0 PRJNA615351 153426 185 1.6 2.96 Thermoplasmatota archaeon 2806419 Archaea Archaea 51.2 1.74e-5   NR MBU0498155.1 2806419 g139326 i0 41.3 1.02162162162162 63 27 90.8 2 175 8 245 304 MBU0498155.1 PQQ-binding-like beta-propeller repeat protein [Thermoplasmatota archaeon] diamond 189 51.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28659522 28659522 PRJNA615351_P_NODE_137887_length_210_cov_1.651429_g123787_i0 PRJNA615351 137887 210 1.651429 3.4680009 Thermoplasmatota archaeon 2806419 Archaea Archaea 48.1 3.12e-4   NR HVL48769.1 2806419 g123787 i0 36.9 0.928571428571429 65 41 92.9 0 210 16 202 266 HVL48769.1 AAA domain-containing protein [Thermoplasmatota archaeon] diamond 195 48.1 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28785652 28785652 PRJNA615351_P_NODE_70687_length_495_cov_2.634783_g56787_i0 PRJNA615351 70687 495 2.634783 13.04217585 Thermoplasmatota archaeon 2806419 Archaea Archaea 81.6 1.5e-14   NR MEF8879813.1 2806419 g56787 i0 36.7 2.03636363636364 166 90 97.6 5 1 483 474 629 MEF8879813.1 IGHMBP2 family helicase [Thermoplasmatota archaeon] diamond 1008 81.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29070076 29070076 PRJNA615351_P_NODE_179768_length_156_cov_1.479339_g165668_i0 PRJNA615351 179768 156 1.479339 2.30776884 Thermoplasmata archaeon 1906666 Archaea Archaea 52.4 3.05e-7   NR MFO7619084.1 1906666 g165668 i0 64.1 1.53846153846154 39 14 75 0 6 122 39 77 MFO7619084.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Thermoplasmata archaeon] diamond 240 52.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29177682 29177682 PRJNA615351_P_NODE_139209_length_208_cov_1.075145_g125109_i0 PRJNA615351 139209 208 1.075145 2.2363016 root 1 Root_unresolved Root_unresolved 47 6.85e-4   NR RLF25817.1 1906666 g125109 i0 48.9 4.44230769230769 45 23 64.9 0 137 3 135 179 RLF25817.1 MAG: hypothetical protein DRN14_07790, partial [Thermoplasmata archaeon] diamond 924 47 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29795985 29795985 PRJNA615351_P_NODE_34831_length_1011_cov_3.118852_g25657_i0 PRJNA615351 34831 1011 3.118852 31.53159372 Thermoplasmatota archaeon 2806419 Archaea Archaea 61.6 2.66e-7   NR MEE3192512.1 2806419 g25657 i0 31.1 0.314540059347181 106 70 31.2 3 570 884 19 122 MEE3192512.1 hypothetical protein [Thermoplasmatota archaeon] diamond 318 61.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29954168 29954168 PRJNA615351_P_NODE_59931_length_597_cov_14.969751_g46714_i0 PRJNA615351 59931 597 14.969751 89.36941347 Thermoplasmatota archaeon 2806419 Archaea Archaea 60.8 1.02e-7   NR MEE3192512.1 2806419 g46714 i0 29.8 0.57286432160804 114 76 55.8 2 97 429 18 130 MEE3192512.1 hypothetical protein [Thermoplasmatota archaeon] diamond 342 60.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30365188 30365188 PRJNA615351_P_NODE_22672_length_1360_cov_4.459623_g16498_i0 PRJNA615351 22672 1360 4.459623 60.6508728 Thermoplasmatota archaeon 2806419 Archaea Archaea 102 8.5e-21   NR MDG6218868.1 2806419 g16498 i0 26.3 3.47205882352941 304 150 67.1 6 1245 334 4 233 MDG6218868.1 tryptophan-rich sensory protein [Thermoplasmatota archaeon] diamond 4722 102 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30554267 30554267 PRJNA615351_P_NODE_64973_length_546_cov_9.859100_g51355_i0 PRJNA615351 64973 546 9.8591 53.830686 Methanomassiliicoccus sp. 2528041 Archaea Archaea 72.8 4.63e-13   NR MDW5563995.1 2528041 g51355 i0 35.2 1.12087912087912 105 67 57.7 1 169 483 2 105 MDW5563995.1 thioredoxin [Methanomassiliicoccus sp.] diamond 612 72.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Methanomassiliicoccus Methanomassiliicoccus sp.
30807105 30807105 PRJNA615351_P_NODE_149114_length_191_cov_1.865385_g135014_i0 PRJNA615351 149114 191 1.865385 3.56288535 Thermoplasmatales archaeon 2268204 Archaea Archaea 43.1 0.0126   NR HEC76766.1 2268204 g135014 i0 48.1 0.848167539267016 27 14 42.4 0 48 128 35 61 HEC76766.1 alanyl-tRNA editing protein [Thermoplasmatales archaeon] diamond 162 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
31293966 31293966 PRJNA615351_P_NODE_12055_length_1878_cov_66.186110_g8478_i1 PRJNA615351 12055 1878 66.18611 1242.9751458 root 1 Root_unresolved Root_unresolved 402 6.769999999999998e-131   NR MDA7464093.1 1915863 g8478 i1 43.9 6.6741214057508 462 251 73.8 4 1791 406 2 455 MDA7464093.1 DNA photolyase family protein [Candidatus Poseidonia alphae] diamond 12534 405 0.992592592592593 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae
31818869 31818869 PRJNA615351_P_NODE_94377_length_343_cov_2.876623_g80288_i0 PRJNA615351 94377 343 2.876623 9.86681689 Thermoplasmatota archaeon 2806419 Archaea Archaea 44.7 0.0194   NR MCL4447742.1 2806419 g80288 i0 38.5 0.454810495626822 52 32 45.5 0 334 179 173 224 MCL4447742.1 hypothetical protein [Thermoplasmatota archaeon] diamond 156 44.7 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32293883 32293883 PRJNA615351_P_NODE_69279_length_507_cov_2.330508_g55424_i0 PRJNA615351 69279 507 2.330508 11.81567556 Aciduliprofundum sp. MAR 2060325 Archaea Archaea 63.5 2.9e-8   NR WP_015282595.1 673860 g55424 i0 42.2 0.49112426035503 83 47 48.5 1 278 33 13 95 WP_015282595.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Aciduliprofundum sp. MAR08-339] diamond 249 63.5 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Aciduliprofundum sp. MAR08-339
32703937 32703937 PRJNA615351_P_NODE_19060_length_1503_cov_19.124659_g13794_i0 PRJNA615351 19060 1503 19.124659 287.44362477 Thermoplasmata archaeon 1906666 Archaea Archaea 53.5 0.00125   NR MFQ5909371.1 1906666 g13794 i0 32.3 0.191616766467066 96 65 19.2 0 305 592 56 151 MFQ5909371.1 GNAT family N-acetyltransferase [Thermoplasmata archaeon] diamond 288 53.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;