RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA615351" and tax_phylum = "Candidatus Iainarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Iainarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA615351 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28438622 28438622 PRJNA615351_P_NODE_31206_length_1099_cov_9.907895_g18874_i1 PRJNA615351 31206 1099 9.907895 108.88776605 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 168 7.049999999999999e-45   NR MBM3282455.1 2026736 g18874 i1 39.7 2.41037306642402 272 153 73.4 6 826 20 51 314 MBM3282455.1 polyprenyl synthetase family protein [Candidatus Iainarchaeum archaeon] diamond 2649 168 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
30143180 30143180 PRJNA615351_P_NODE_135292_length_215_cov_1.522222_g121192_i0 PRJNA615351 135292 215 1.522222 3.2727773 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 42.7 0.0249   NR MDO8624619.1 2026736 g121192 i0 32.1 0.781395348837209 56 38 78.1 0 19 186 150 205 MDO8624619.1 SufD family Fe-S cluster assembly protein [Candidatus Iainarchaeum archaeon] diamond 168 42.7 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
30554287 30554287 PRJNA615351_P_NODE_80713_length_421_cov_1.968912_g66671_i0 PRJNA615351 80713 421 1.968912 8.28911952 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 89.7 9.07e-18   NR MBI4210506.1 2026736 g66671 i0 46.7 0.641330166270784 90 48 64.1 0 143 412 130 219 MBI4210506.1 DUF4139 domain-containing protein [Candidatus Iainarchaeum archaeon] diamond 270 89.7 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;