RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA615175" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA615175 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27901390 27901390 PRJNA615175_P_NODE_7145_length_565_cov_7.955285_g6980_i0 PRJNA615175 7145 565 7.955285 44.94736025 Mitosporidium daphniae 1485682 Fungi Fungi 78.2 8.53e-14   NR XP_013236389.1 1485682 g6980 i0 36 0.738053097345133 139 80 70.1 5 407 12 100 236 XP_013236389.1 uncharacterized protein DI09_9p70 [Mitosporidium daphniae] diamond 417 78.2 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;