RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA615175" and tax_phylum = "Candidatus Muiribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Muiribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA615175 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27143127 27143127 PRJNA615175_P_NODE_5202_length_675_cov_4.300664_g5039_i0 PRJNA615175 5202 675 4.300664 29.029482 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 94 4.79e-18   NR MCK9476368.1 2053465 g5039 i0 49.5 0.422222222222222 95 45 42.2 1 84 368 889 980 MCK9476368.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 285 94 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum
28154364 28154364 PRJNA615175_P_NODE_3565_length_822_cov_4.384513_g3417_i0 PRJNA615175 3565 822 4.384513 36.04069686 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 252 1.55e-76   NR MCK9477009.1 2053465 g3417 i0 53.3 1.77372262773723 227 104 82.1 2 694 20 246 472 MCK9477009.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 1458 252 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;